ggpicrust2: Make 'PICRUSt2' Output Analysis and Visualization Easier

Provides a convenient way to analyze and visualize 'PICRUSt2' output with pre-defined plots and functions. Allows for generating statistical plots about microbiome functional predictions and offers customization options. Features a one-click option for creating publication-level plots, saving time and effort in producing professional-grade figures. Streamlines the 'PICRUSt2' analysis and visualization process. For more details, see Yang et al. (2023) <arXiv:2303.10388>.

Version: 1.7.0
Depends: R (≥ 3.5.0)
Imports: ALDEx2, aplot, DESeq2, dplyr, edgeR, GGally, ggplot2, grid, lefser, limma, Maaslin2, metagenomeSeq, MicrobiomeStat, readr, stats, SummarizedExperiment, tibble, tidyr, ggprism, phyloseq, patchwork, circlize
Suggests: covr, testthat (≥ 3.0.0), cowplot, Biobase, devtools, KEGGREST, ComplexHeatmap, ggforce, ggplotify, BiocGenerics, BiocManager, magrittr, utils, knitr, rmarkdown
Published: 2023-05-31
Author: Chen Yang [aut, cre], Liangliang Zhang [aut]
Maintainer: Chen Yang <cafferychen7850 at>
License: MIT + file LICENSE
NeedsCompilation: no
Materials: README NEWS
CRAN checks: ggpicrust2 results


Reference manual: ggpicrust2.pdf
Vignettes: Using ggpicrust2


Package source: ggpicrust2_1.7.0.tar.gz
Windows binaries: r-devel:, r-release:, r-oldrel:
macOS binaries: r-release (arm64): not available, r-oldrel (arm64): not available, r-release (x86_64): not available, r-oldrel (x86_64): not available
Old sources: ggpicrust2 archive


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