Last updated on 2025-12-12 07:50:15 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 12.44 | 244.99 | 257.43 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 9.91 | 248.10 | 258.01 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 31.00 | 284.18 | 315.18 | OK | |
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 39.00 | 322.78 | 361.78 | OK | |
| r-devel-windows-x86_64 | 1.1.4 | 20.00 | 187.00 | 207.00 | OK | |
| r-patched-linux-x86_64 | 1.1.4 | 15.20 | 300.73 | 315.93 | OK | |
| r-release-linux-x86_64 | 1.1.4 | 14.16 | 251.46 | 265.62 | OK | |
| r-release-macos-arm64 | 1.1.4 | OK | ||||
| r-release-macos-x86_64 | 1.1.4 | 12.00 | 178.00 | 190.00 | ERROR | |
| r-release-windows-x86_64 | 1.1.4 | 21.00 | 187.00 | 208.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.4 | OK | ||||
| r-oldrel-macos-x86_64 | 1.1.4 | 10.00 | 204.00 | 214.00 | ERROR | |
| r-oldrel-windows-x86_64 | 1.1.4 | 25.00 | 232.00 | 257.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [87s/127s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.652, system: 0.043, elapsed: 2.407 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.344, system: 0.086, elapsed: 11.847 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.208, system: 0.019, elapsed: 0.376 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.002, system: 0.209, elapsed: 4.998 seconds]
Computing values for grid cells...
... done. [user: 0.175, system: 0.005, elapsed: 0.244 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.950, system: 0.390, elapsed: 20.637 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.545, system: 0.036, elapsed: 1.942 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.545, system: 0.153, elapsed: 11.341 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.202, system: 0.017, elapsed: 0.296 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.136, system: 0.268, elapsed: 5.898 seconds]
Computing values for grid cells...
... done. [user: 0.193, system: 0.011, elapsed: 0.314 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.174, system: 0.512, elapsed: 20.602 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.814, system: 0.083, elapsed: 2.491 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.851, system: 0.328, elapsed: 14.804 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.202, system: 0.016, elapsed: 0.347 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.108, system: 0.285, elapsed: 5.678 seconds]
Computing values for grid cells...
... done. [user: 0.191, system: 0.022, elapsed: 0.269 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.240, system: 0.270, elapsed: 1.059 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 18.051, system: 1.051, elapsed: 25.546 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.755, system: 0.080, elapsed: 2.308 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.666, system: 0.208, elapsed: 22.139 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.201, system: 0.013, elapsed: 0.574 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.977, system: 0.181, elapsed: 8.587 seconds]
Computing values for grid cells...
... done. [user: 0.182, system: 0.004, elapsed: 0.313 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 11.325, system: 0.840, elapsed: 18.828 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 27.763, system: 1.356, elapsed: 53.897 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [85s/148s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.756, system: 0.078, elapsed: 2.950 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.666, system: 0.246, elapsed: 14.394 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.198, system: 0.018, elapsed: 0.263 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.964, system: 0.284, elapsed: 5.857 seconds]
Computing values for grid cells...
... done. [user: 0.186, system: 0.008, elapsed: 0.287 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.328, system: 0.671, elapsed: 24.646 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.758, system: 0.069, elapsed: 3.240 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.694, system: 0.252, elapsed: 15.362 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.197, system: 0.016, elapsed: 0.359 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.134, system: 0.320, elapsed: 7.448 seconds]
Computing values for grid cells...
... done. [user: 0.175, system: 0.010, elapsed: 0.274 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.520, system: 0.706, elapsed: 27.623 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.826, system: 0.094, elapsed: 2.747 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.609, system: 0.185, elapsed: 19.994 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.199, system: 0.012, elapsed: 0.436 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.685, system: 0.185, elapsed: 6.959 seconds]
Computing values for grid cells...
... done. [user: 0.169, system: 0.005, elapsed: 0.323 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.106, system: 0.255, elapsed: 1.421 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 17.238, system: 0.769, elapsed: 33.133 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.671, system: 0.036, elapsed: 3.464 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.594, system: 0.095, elapsed: 19.303 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.194, system: 0.012, elapsed: 0.359 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.728, system: 0.177, elapsed: 6.451 seconds]
Computing values for grid cells...
... done. [user: 0.169, system: 0.004, elapsed: 0.361 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.623, system: 0.470, elapsed: 22.459 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 26.636, system: 0.819, elapsed: 53.653 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-oldrel-macos-x86_64