Performs sparse discriminant analysis on a combination of node and leaf predictors when the predictor variables are structured according to a tree, as described in Fukuyama et al. (2017) <doi:10.1371/journal.pcbi.1005706>.
Version: | 0.0.5 |
Depends: | R (≥ 3.4.0) |
Imports: | sparseLDA (≥ 0.1.9), Matrix (≥ 1.2.10), mvtnorm (≥ 1.0.6), reshape2 (≥ 1.4.2), gtable (≥ 0.2.0), phyloseq (≥ 1.22.3), ggplot2 (≥ 2.2.1), ape (≥ 5.1), grid, stats |
Suggests: | adaptiveGPCA (≥ 0.1), knitr (≥ 1.16), testthat (≥ 2.0.0), markdown, rmarkdown |
Published: | 2021-05-14 |
DOI: | 10.32614/CRAN.package.treeDA |
Author: | Julia Fukuyama [aut, cre] |
Maintainer: | Julia Fukuyama <julia.fukuyama at gmail.com> |
License: | GPL-2 |
URL: | https://github.com/jfukuyama/treeda |
NeedsCompilation: | no |
CRAN checks: | treeDA results |
Reference manual: | treeDA.pdf |
Vignettes: |
treeDA vignette |
Package source: | treeDA_0.0.5.tar.gz |
Windows binaries: | r-devel: treeDA_0.0.5.zip, r-release: treeDA_0.0.5.zip, r-oldrel: treeDA_0.0.5.zip |
macOS binaries: | r-devel (arm64): treeDA_0.0.5.tgz, r-release (arm64): treeDA_0.0.5.tgz, r-oldrel (arm64): treeDA_0.0.5.tgz, r-devel (x86_64): treeDA_0.0.5.tgz, r-release (x86_64): treeDA_0.0.5.tgz, r-oldrel (x86_64): treeDA_0.0.5.tgz |
Old sources: | treeDA archive |
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