To cite phytools in a publication please use:
Revell L (2012). “phytools: An R package for phylogenetic comparative biology (and other things).” Methods in Ecology and Evolution, 3, 217-223. doi:10.1111/j.2041-210X.2011.00169.x.
As phytools is continually evolving you may also want to cite its version number (found with 'library(help = phytools)' or 'packageVersion("phytools")').
Corresponding BibTeX entry:
@Article{, title = {phytools: An {R} package for phylogenetic comparative biology (and other things).}, author = {Liam J. Revell}, journal = {Methods in Ecology and Evolution}, year = {2012}, volume = {3}, pages = {217-223}, doi = {10.1111/j.2041-210X.2011.00169.x}, }