netassoc: Inference of Species Associations from Co-Occurrence Data

Infers species associations from community matrices. Uses local and (optional) regional-scale co-occurrence data by comparing observed partial correlation coefficients between species to those estimated from regional species distributions. Extends Gaussian graphical models to a null modeling framework. Provides interface to a variety of inverse covariance matrix estimation methods.

Version: 0.7.0
Depends: igraph, infotheo
Imports: corpcor, huge, vegan
Published: 2022-07-20
DOI: 10.32614/CRAN.package.netassoc
Author: Benjamin Blonder, Naia Morueta-Holme
Maintainer: Benjamin Blonder <benjamin.blonder at>
License: GPL-3
NeedsCompilation: no
CRAN checks: netassoc results


Reference manual: netassoc.pdf


Package source: netassoc_0.7.0.tar.gz
Windows binaries: r-devel:, r-release:, r-oldrel:
macOS binaries: r-release (arm64): netassoc_0.7.0.tgz, r-oldrel (arm64): netassoc_0.7.0.tgz, r-release (x86_64): netassoc_0.7.0.tgz, r-oldrel (x86_64): netassoc_0.7.0.tgz
Old sources: netassoc archive


Please use the canonical form to link to this page.