ePCR v0.10.0/1 (Release date: 2024-01-29) ============== Changes: * Package size compression * Old Rnw changed to run as Rmd vignette instead * methods-package imported instead of suggested for exportClasses and exportMethods ePCR v0.9.10 (Release date: 2022-09-19) ============== Changes: * Dependencies updated to Matrix package as requested by its authors ePCR v0.9.9-12 (Release date: 2020-01-28) ============== Changes: * Calling predict-function directly as exported from the glmnet-package ePCR v0.9.9-10/11 (Release date: 2019-11-23) ============== Changes: * Updated compatibility with the latest version of glmnet and its changed namespace. * Updated newest variable visibility requirements in examples * Fixed a bug that occurred in Debian distro (meanrank-function class checking) ePCR v0.9.9-9 (Release date: 2019-04-11) ============== Changes: * Fixed deprecation of the function survival::survConcordance using survival::concordance. ePCR v0.9.9-8 (Release date: 2018-07-30) ============== Changes: * Additional failsafes to the fitting procedure, e.g. when the CV fold-count is too high in relation to the supplied N observations. * Fitting procedure can be run through even with redundant CV results instead of an ambiguous error message. ePCR v0.9.9-7 (Release date: 2018-07-17) ============== Changes: * Fixed a bug that occurred when multiple equal CV optima were detected in the alpha/lambda grid * Reference for the package published in Bioinformatics ePCR v0.9.9-6 (Release date: 2018-05-28) ============== Changes: * Trimming functions and modified .RData for both ePCR S4-objects as well as glmnet model fits to reduce tarball size and installed package size * Using R.rsp to create vignettes from pre-computed .tex ePCR v0.9.9-5 (Release date: 2018-05-23) ============== Changes: * Minor improvements to the code, such as how the x.expand slot is called inside PSPs * New extensive step-by-step vignette * Attempted to reduce the size of the /data/ folder, since on some platforms the installed package exceeds 5 MB just barely