2019-04-26 Martin Mächler * DESCRIPTION (Version): 1.4-3 * src/predict.c (predict_vlmc): "fix" 'q1->count' pointer 2018-10-03 Martin Maechler * DESCRIPTION (Version): 1.4-2: add registration (of C code called); also import everything needed (incl from std. packages). 2015-04-16 Martin Maechler * DESCRIPTION (Version): 1.4-1 * src/predict.c (predict_vlmc): careful for "constant data": alpa_len == m == 1 ! 2014-10-04 Martin Maechler * R/sim.R: drop "wrong" 'n' argument; add simple class(.) and a print() method which mostly elides the large "seed" attribute. * R/vlmc.R (print.vlmc): show cutoff in any case 2012-09-11 Martin Maechler * DESCRIPTION (Version): 1.3-13 * src/vlmc.h (max_alpha_len): now allow alphabet length up to 95. * R/vlmc.R (vlmc): and catch the case when it would be longer. Prompted by Jesse Bridgewater's e-mail and Stackoverflow http://stackoverflow.com/questions/11236776/r-package-vlmc-dies-if-state-space-size-exceeds-27 2011-12-23 Martin Maechler * DESCRIPTION (Depends): R >= 2.13.0: Want BIC() and nobs() to work. 2011-12-22 Martin Maechler * NAMESPACE: useDynLib() but also hide most S3 methods. * R/entropy.R (logLik.vlmc): add 'nobs' --> BIC() works as well. * src/io.c: use quote (') instead of backquote(`) in C output, too. 2009-12-12 Martin Maechler * DESCRIPTION (Version): 1.3-12 * R/vlmc.R (print.vlmc, etc): do not use `vlmc' (backquote) anymore. * tests/pred-vlmc.Rout.save: update consequently 2009-11-18 Martin Maechler * DESCRIPTION (Version): 1.3-11 * R/vlmc.R: ditto * man/simulate.vlmc.Rd: fix \link[]{} 2006-09-18 Martin Maechler * README-C: moved from ./src/ to toplevel (pedantic QA) 2006-09-08 Martin Maechler * DESCRIPTION (LazyData): yes * DESCRIPTION (Version, Date): 1.3-10 2005-10-06 Martin Maechler * DESCRIPTION (Version): 1.3-9 * R/vlmc.R: dito * R/sim.R (simulate.vlmc): update to new (R 2.2.0) generic simulate(). 2005-03-25 Martin Maechler * DESCRIPTION (Version): 1.3-8 * R/vlmc.R: dito * NAMESPACE: new * R/zzz.R (.onLoad): instead of .First.lib * man/bnrf1.Rd: drop 'require("ts")' 2004-07-07 Martin Maechler * man/vlmc.Rd: updated reference: JCGS publication 2004-05-05 Martin Maechler * DESCRIPTION (Version, Date): 1.3-7 * R/rcplot.R (RCplot): new boxplot() NA behavior -> need to drop NAs myself. 2003-12-17 Martin Maechler * DESCRIPTION (Version, Date): 1.3-6 - released * R/zzz.R (.First.lib): mva or stats depending on R version * R/entropy.R (AIC): AIC.vlmc for R ver < 1.4 2003-11-07 Martin Maechler * DESCRIPTION (Version, Date): 1.3-5 - release to CRAN * man/alphabet.Rd: finally added * man/int2char.Rd: link to and from * man/alpha2int.Rd: 2003-10-27 Martin Maechler * TODO: some update; need to prioritize this! * man/as.dendrogram.vlmc.Rd: example had typo; now also extended 2003-09-16 Martin Maechler * DESCRIPTION (Note): instead of `Versionnote' 2003-09-10 Martin Maechler * R/dendrogram.R (as.dendrogram.vlmc): much better; still to go * man/as.dendrogram.vlmc.Rd (as.dendrogram.vlmc): first plot 2003-09-08 Martin Maechler * R/alphabet.R: new alphabet() generic and method. a first step towards extending alphabet size to more than 26 2003-08-30 Martin Maechler * man/simulate.vlmc.Rd: typo; see also. * man/predict.vlmc.Rd: see also to simulate. 2003-08-29 Martin Maechler * R/vlmc.R (vlmc): argument must be atomic ("simple vector") 2003-07-09 Martin Maechler * tests/iid-cutoff.R: use old RNG (back-compat.) * tests/iid-cutoff.Rout.save: ditto; (+ overdue update) * tests/pred-vlmc.Rout.save: in output * man/vlmc.Rd: extraneous `object' 2003-01-31 Martin Maechler * DESCRIPTION (Version): 1.3-4 * man/vlmc.Rd: updated JCGS reference 2002-11-29 Martin Maechler * src/cutoffs.c: * src/drawvlmc.c: * src/saveload.c (ifndef Macintosh): changes from Stefano I. 2002-11-25 Martin Maechler * man/residuals.vlmc.Rd: RCS; seealso RCplot; "iy" replaced * man/predict.vlmc.Rd: RCS & seealso * man/RCplot.Rd: typo and ref.update * man/vlmc.Rd: now in RCS * man/draw.vlmc.Rd: now in RCS 2002-05-18 Martin Maechler * R/vlmc.R: move vlmctree to * R/dendrogram.R. * R/dendrogram.R (as.dendrogram.vlmc): finally starting 2002-05-09 Martin Maechler * R/predict.R (print.predict.vlmc): comment about fractions() * README: had some outdated text about "beta" .. 2002-03-13 Martin Maechler * DESCRIPTION (Version): 1.3-3 * man/vlmc.version.Rd: * data/bnrf1.R: use one .rda file and no auxiliary names * R/conversion.R (id2ctxt): add fuzz to floor(.), e.g. for windows 2002-03-11 Martin Maechler * Version 1.3-2 ---> CRAN * tests/pred-vlmc.R: `TRUE', not `T' * tests/iid-cutoff.R: use smaller N (save CPU) 2002-03-08 Martin Maechler * tests/pred-vlmc.R: oops! remove ancient write stuff to MM's files 2002-03-06 Martin Maechler * man/vlmc.Rd: removed extraneous usage \method{summary}{vlmc}(.....) * tests/pred-vlmc.Rout.save: oops -- forgot update for "no flags" below * DESCRIPTION (Version): 1.3-2 ---> CRAN 2002-03-06 Martin Maechler * R/predict.R (predict.vlmc): no more "flags" attribute for "probs" * R/zzz.R (.First.lib): require MASS & get rid of these functions here. * INDEX: updated manually (comparing w automatic) * man/bnrf1.Rd: longer title * tests/pred-vlmc.R: don't show vlmc.version * DESCRIPTION (Version): 1.3-1 2002-03-04 Martin Maechler * R/rcplot.R (RCplot): new function 2002-02-08 Martin Maechler * R/vlmc.R (print.summary.vlmc, summary.vlmc): nicer depth summary 2002-02-08 Martin Maechler * DESCRIPTION (Version): 1.3-0 * src/fitvlmc.c: (vlmc): IMPORTANT change : discount the first observation from the top-level counts! ==> correct Loglik/entropy and probs --- results should change only when the toplevel-node is "internal/hidden", i.e. not full, i.e. has ``lumped children''. 2002-02-05 Martin Maechler * R/vlmc.R (summmary.vlmc): now also return (and print) the ``depth statistics'' 2002-02-04 Martin Maechler * man/predict.vlmc.Rd: typo +.. 2002-01-30 Martin Maechler * man/summary.vlmc.Rd: new file. * R/vlmc.R (summary.vlmc): return object. (print.summary.vlmc): new function; cleaner output; vvec.printing=FALSE. 2001-11-09 Martin Maechler * DESCRIPTION (Version): 1.2-1 {not yet debugged} * man/predict.vlmc.Rd: new fitted.vlmc() * R/predict.R: (ditto), and define type = "classwise" residuals * man/residuals.vlmc.Rd: * man/OZrain.Rd: work around plot.ts bug in R <= 1.3.1 * R/vlmc.R: print.vlmc(): also show `n' 2001-10-29 Martin Maechler * man/int2char.Rd: see also each other * man/alpha2int.Rd: 2001-10-22 Martin Maechler * R/predict.R: fix in factor conversion (previously affected cases where newdata did not contain all levels, or had levels in different order). * man/predict.vlmc.Rd: and *.R: type = "class" now gives factor. 2001-10-02 Martin Maechler * DESCRIPTION (Versionnote): 1.2-0 "released" * tests/pred-vlmc.R: new test (from MM's ../R-ex/ ) * R/vlmc.R: eliminated check.memory option 2001-10-01 Martin Maechler * tests/iid-cutoff.R: new test-example * src/prune.c: found and plugged the memory leak -- hooray! 2001-09-28 Martin Maechler * R/sim.R: new `n.start' argument; change `length.new' to `n' * data/OZrain.R: New dataset (Daily rainfalls in Melbourne) * man/OZrain.Rd: 2001-09-24 Martin Maechler * R/vlmc.R: new `alpha.c' argument for specifying an alpha for qchisq instead of cutoff.prune * man/AIC.vlmc.Rd is no longer needed (from R 1.4.x) because AIC.default() will work via logLik.vlmc() 2001-04-27 Martin Maechler * DESCRIPTION (Version): 1.1-6 [for a private release] 2001-03-09 Martin Maechler * man/id2ctxt.Rd: new * man/int2char.Rd: new * more help file improvements * R/entropy.R: AIC(object, ... , k = 2) for nlme (and some MASS) compatibility 2001-03-08 Martin Maechler * DESCRIPTION (Version): 1.1-5 * data/bnrf1.R: Added example data, namely two DNA sequences. * man/vlmc.Rd: fix reference * make-dvi-Reference: Small script for the reference manual 2001-02-08 Martin Maechler * DESCRIPTION (Version): 1.1-4 * R/vlmc.R: add AIC to print() {and hence summary} output 2001-01-10 Martin Maechler * DESCRIPTION (Version): 1.1-3 * README: new file * man/AIC.vlmc.Rd: new * R/entropy.R: AIC()