Last updated on 2026-01-23 19:50:32 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 12.04 | 262.25 | 274.29 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | OK | ||||
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 26.00 | 298.75 | 324.75 | OK | |
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 30.00 | 403.35 | 433.35 | OK | |
| r-devel-windows-x86_64 | 1.1.4 | 19.00 | 193.00 | 212.00 | OK | |
| r-patched-linux-x86_64 | 1.1.4 | 16.07 | 259.11 | 275.18 | OK | |
| r-release-linux-x86_64 | 1.1.4 | 13.99 | 270.09 | 284.08 | OK | |
| r-release-macos-arm64 | 1.1.4 | OK | ||||
| r-release-macos-x86_64 | 1.1.4 | 10.00 | 380.00 | 390.00 | ERROR | |
| r-release-windows-x86_64 | 1.1.4 | 20.00 | 191.00 | 211.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.4 | OK | ||||
| r-oldrel-macos-x86_64 | 1.1.4 | 10.00 | 306.00 | 316.00 | ERROR | |
| r-oldrel-windows-x86_64 | 1.1.4 | 26.00 | 254.00 | 280.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [98s/330s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.574, system: 0.045, elapsed: 2.710 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.590, system: 0.090, elapsed: 13.479 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.213, system: 0.014, elapsed: 0.621 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 6.936, system: 0.739, elapsed: 52.398 seconds]
Computing values for grid cells...
... done. [user: 0.171, system: 0.003, elapsed: 0.179 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 19.058, system: 0.916, elapsed: 70.257 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.535, system: 0.032, elapsed: 2.265 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.616, system: 0.081, elapsed: 13.489 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.212, system: 0.014, elapsed: 0.578 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 6.506, system: 0.634, elapsed: 41.159 seconds]
Computing values for grid cells...
... done. [user: 0.171, system: 0.003, elapsed: 0.197 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 18.598, system: 0.785, elapsed: 58.337 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.586, system: 0.033, elapsed: 2.587 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.515, system: 0.084, elapsed: 12.850 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.302, system: 0.015, elapsed: 1.240 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 6.893, system: 0.833, elapsed: 113.579 seconds]
Computing values for grid cells...
... done. [user: 0.178, system: 0.004, elapsed: 0.471 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.324, system: 0.371, elapsed: 2.415 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 20.477, system: 1.374, elapsed: 134.377 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.555, system: 0.040, elapsed: 4.128 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.614, system: 0.098, elapsed: 15.156 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.218, system: 0.015, elapsed: 0.416 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 6.812, system: 0.658, elapsed: 25.667 seconds]
Computing values for grid cells...
... done. [user: 0.183, system: 0.004, elapsed: 0.193 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 11.153, system: 0.580, elapsed: 13.606 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 30.253, system: 1.426, elapsed: 60.385 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [87s/219s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.591, system: 0.041, elapsed: 3.874 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.682, system: 0.078, elapsed: 23.740 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.201, system: 0.015, elapsed: 0.545 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.295, system: 0.406, elapsed: 11.704 seconds]
Computing values for grid cells...
... done. [user: 0.172, system: 0.004, elapsed: 0.422 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.516, system: 0.564, elapsed: 41.758 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.584, system: 0.028, elapsed: 4.075 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.640, system: 0.067, elapsed: 24.015 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.200, system: 0.013, elapsed: 0.521 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.325, system: 0.396, elapsed: 11.483 seconds]
Computing values for grid cells...
... done. [user: 0.175, system: 0.003, elapsed: 0.470 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.486, system: 0.526, elapsed: 41.996 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.642, system: 0.036, elapsed: 4.116 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.628, system: 0.087, elapsed: 24.204 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.201, system: 0.014, elapsed: 0.563 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.328, system: 0.401, elapsed: 12.128 seconds]
Computing values for grid cells...
... done. [user: 0.178, system: 0.004, elapsed: 0.471 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.211, system: 0.293, elapsed: 2.117 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 17.865, system: 0.856, elapsed: 45.314 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.592, system: 0.031, elapsed: 4.615 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.595, system: 0.067, elapsed: 25.585 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.194, system: 0.013, elapsed: 0.501 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.308, system: 0.396, elapsed: 12.355 seconds]
Computing values for grid cells...
... done. [user: 0.170, system: 0.004, elapsed: 0.481 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.793, system: 0.506, elapsed: 30.271 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 27.318, system: 1.037, elapsed: 75.594 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-oldrel-macos-x86_64