Last updated on 2024-04-18 20:55:34 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.2 | 52.92 | 672.61 | 725.53 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.2 | 42.78 | 470.71 | 513.49 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.2 | 882.15 | OK | |||
| r-devel-linux-x86_64-fedora-gcc | 1.1.2 | 869.37 | OK | |||
| r-prerel-macos-arm64 | 1.1.2 | 182.00 | ERROR | |||
| r-prerel-windows-x86_64 | 1.1.2 | 47.00 | 405.00 | 452.00 | OK | |
| r-patched-linux-x86_64 | 1.1.2 | 46.44 | 630.11 | 676.55 | OK | |
| r-release-linux-x86_64 | 1.1.2 | 47.65 | 634.29 | 681.94 | OK | |
| r-release-macos-arm64 | 1.1.2 | 162.00 | OK | |||
| r-release-macos-x86_64 | 1.1.2 | 291.00 | OK | |||
| r-release-windows-x86_64 | 1.1.2 | 60.00 | 572.00 | 632.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.2 | 170.00 | OK | |||
| r-oldrel-windows-x86_64 | 1.1.2 | 62.00 | 532.00 | 594.00 | OK |
Version: 1.1.2
Check: examples
Result: ERROR
Running examples in ‘ENMTools-Ex.R’ failed
The error most likely occurred in:
> ### Name: enmtools.maxent
> ### Title: Takes an emtools.species object with presence and background
> ### points, and builds a maxent model
> ### Aliases: enmtools.maxent
>
> ### ** Examples
>
> if(check.extras("enmtools.maxent")) {
+ ## maxent is not working on some platforms so use try()
+ try(enmtools.maxent(iberolacerta.clade$species$monticola, env = euro.worldclim))
+ }
*** caught illegal operation ***
address 0x17feb2f78, cause 'illegal trap'
Traceback:
1: rJava::.jcall(mxe, "S", "fit", c("autorun", "-e", afn, "-o", dirout, "-s", pfn, args))
2: .local(x, p, ...)
3: maxent(x, p, ...)
4: maxent(x, p, ...)
5: .local(x, p, ...)
6: dismo::maxent(raster::stack(env), p = analysis.df[analysis.df$presence == 1, 1:2], a = analysis.df[analysis.df$presence == 0, 1:2], ...)
7: dismo::maxent(raster::stack(env), p = analysis.df[analysis.df$presence == 1, 1:2], a = analysis.df[analysis.df$presence == 0, 1:2], ...)
8: withVisible(...elt(i))
9: capture.output(this.mx <- dismo::maxent(raster::stack(env), p = analysis.df[analysis.df$presence == 1, 1:2], a = analysis.df[analysis.df$presence == 0, 1:2], ...))
10: enmtools.maxent(iberolacerta.clade$species$monticola, env = euro.worldclim)
11: doTryCatch(return(expr), name, parentenv, handler)
12: tryCatchOne(expr, names, parentenv, handlers[[1L]])
13: tryCatchList(expr, classes, parentenv, handlers)
14: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
15: try(enmtools.maxent(iberolacerta.clade$species$monticola, env = euro.worldclim))
An irrecoverable exception occurred. R is aborting now ...
Flavor: r-prerel-macos-arm64