f194c3a49bba5aafdc5f4a9e080ddeab *DESCRIPTION
fb13c7b2eff6de09b8251c1f9fdc2d8d *NAMESPACE
7cc39dd248bc022a6e04d1fd9b5b8ba3 *NEWS.md
6e398ec0c972a70ca6d03e06d7d8a3c5 *R/AAA.R
c5237bb187215410023500fa87513d0e *R/AllClasses.R
4cd00fc874dbe0e9186dd09e08f2c94a *R/AllGenerics.R
c3d8e9a062b89af5e72825e17d8dc48d *R/DSC_EMM.R
fe86c48dcd3c548c4c51c6ebe58f995b *R/DSC_tNN.R
b83aaa62e0e7d7d7f328ec006c677cc7 *R/EMM.R
26f19c4a290294144007edef447ffdf1 *R/SimpleMC.R
d29046e9a87066e71d6ccbdb288eea56 *R/TRAC.R
e65cb080a620c7b465431f8e696876e5 *R/TRACDS.R
f8f0457c6233f951eda6026fb6617782 *R/build.R
2f1e7c6b7f97a4ef04307c81b5ce56e9 *R/cluster.R
ada66d7d921f14e77f842605b4470ba2 *R/combine.R
9217725a33ad028b195738eb20031eef *R/compact.R
35e18270ef62cb5e7b8611bb208859a2 *R/ellipse.R
b79dd6f3e7e9a6a27d549c3b622f7547 *R/fade.R
caf390dec1834582546531285d4ea318 *R/graph.R
130ca72cbf04528cd911fb4f497f54db *R/map.R
2841d220c8bbcdb61459c91098c9fad7 *R/merge.R
a1a810959dae39ccc703f3209d8ce5b2 *R/object.size.R
30f288f843aaa81d5234cab91f272e37 *R/onload.R
d2ab0aecfe6df33cfdaf115a5d79b4e6 *R/plot.R
240a91cefe1bbd19e04c18bd29676003 *R/predict.R
da6e8037ad2781cb9136ebb3626d86bf *R/prune.R
1b85714602b27bf3c12451de8ba5ab08 *R/recluster.R
cc678e5da4226d3a35ce0e803253c674 *R/remove.R
f044ed86ca7bbfe7fb13f6453e32abb4 *R/reset.R
e7e2b9d1b9f0f5e993126d4166fcaf7f *R/score.R
c2c08758d5a3511fec6d206ad27eee46 *R/smooth_transitions.R
df01fa04095cbef8d539f8feebe4e7ed *R/synthetic_stream.R
86d4f59766dcd0eeb3cd21819d6d0a37 *R/tNN.R
acf81055f41c2886b3e0bef810ac16fe *R/transition.R
41ce863de33b2804c85964f3f8adb8e9 *R/update.R
3e05444b181625b0d634e6b5db848578 *README.md
1961639f6f4f7f9efffa91b624b3d060 *build/partial.rdb
cebc4d0e7d5816a4774a50a78e1d7d58 *build/vignette.rds
56285883360a099655b8a3da23ba075c *data/16S.rda
5f2491c73b2d086e49ae1664b3e49f71 *data/Derwent.rda
b16a3e70fb48bb3deedc3a979e0c53ec *data/EMMTraffic.rda
ce51fe3b5f3870b2eecb9d0eb65d42f1 *data/EMMsim.rda
8544eb314eb1faf4db56386a02461c94 *inst/CITATION
8b7f1b6f641e128201f9ce903e33cf2f *inst/README_files/example_data-1.png
7593dcf3c6da9f83f8637670d1529117 *inst/README_files/example_model-1.png
850da4f6b9594895cec05a608433f858 *inst/doc/rEMM.R
f0e294daed3e64b98ee4777cbe18cf9a *inst/doc/rEMM.Rnw
8c747a3efff2842c5030b834970d16b3 *inst/doc/rEMM.pdf
b4e04fc9f5a71c2beced1f9983284a84 *man/16S.Rd
8c08209696f36f241b5b177b0580afdc *man/DSC_EMM.Rd
398ea93043be851c59981f7a7ec69432 *man/Derwent.Rd
5b534fc0ae36344c61ac2113d9365f27 *man/EMM-class.Rd
d529c6cd73e836655cc7419b742f91bb *man/EMM.Rd
1d0ee3414469c7890e533e8dd2da181a *man/EMMTraffic.Rd
152f4cf7c7f98b38e8b514a672aa118f *man/EMMsim.Rd
659a86ad221026082e922d9f93d1db6e *man/TRAC-class.Rd
2ec7d8ffd7172bb87806764e8c1b32bf *man/TRACDS-class.Rd
cc3f878407e8f994c86878f45f89f5c3 *man/build.Rd
565015735c4072a79752d24f10615f26 *man/cluster.Rd
21c2e98866b20f84085fc71c288e8b4b *man/combine.Rd
651e6e23b48a3d93b012bfeb6854dbca *man/fade.Rd
9cdbc7da13a7a228f4fbccb0b5721a33 *man/figures/logo.svg
b3a4dbe34302a0af31ff1a4af317dbfc *man/find_clusters.Rd
3a19aae3cfb78e9146aa9590d428c92c *man/merge.Rd
e5cdd88bafdfaaa9d056dfcde3353acb *man/plot.EMM.Rd
2f57fa4823257f0f152ef551db3cf4b3 *man/predict.Rd
b198a0794b5f94b89ec82c60dd4b3055 *man/prune.Rd
18c6add6c0b0a86183daf3b965162047 *man/recluster.Rd
fb68baf16169ea7522c17a8d1b1fa246 *man/remove.Rd
69453a20cf3830c9c7fea5766a34cf24 *man/score.Rd
2765ecac733716a9a5178730108f5075 *man/smooth_transitions.Rd
8c8c01614cfca8b66d304cd09239674a *man/synthetic_stream.Rd
5886638276608d26a1670b9bccd43bd9 *man/tNN-class.Rd
80afa8f301c3ab3db200d2e703afff2a *man/transition.Rd
26c1255ca74b4fb8a76c6ddf376a2299 *man/transition_table.Rd
ae921748ad1c36fc99e27124b6d8af6c *man/update.Rd
55bfd6cd9d365dd10216b99076b0c0e3 *src/dll.c
aa0d53dd22e24746718cb448e0640dd9 *src/matrix.c
4c2e45aa121811e49e8545d51d40c84b *src/matrix_pos.h
808e638ed8a70147b933e8813da8d7ec *tests/testthat.R
a1f44656e8113cb754db45ac95b11cdb *tests/testthat/test-EMM.R
4181b37df52794ad41bc3b5d8f3c48b7 *tests/testthat/test-remove.R
726b2291e735287065a818720d784ca1 *vignettes/emm.bib
970ae0d68a72d5cde3ae230217e0b414 *vignettes/misc.bib
f0e294daed3e64b98ee4777cbe18cf9a *vignettes/rEMM.Rnw
7171b31518efe6ae6b27893376a1e006 *vignettes/rEMM.bib
364822f0b911ef5c263a524435ab2d78 *vignettes/rEMM_class.odg
23464b1191906a9afc6ecddd7571f0c4 *vignettes/rEMM_class.pdf
93acac9a714cf579d86dae090b1a0d35 *vignettes/rna_sequences.bib
be99981b0ebead7bca77d7c5ba9f91fc *vignettes/stream_clust.bib
