241f9b9ab7a025773d2926514748e924 *DESCRIPTION
bd409ad68a147c1cc56bec12baf9c4e4 *NAMESPACE
4aeec803cef4ef5c2b7dcf5ac27e2105 *NEWS.md
623f35d863fd2f4278b1a7d25fd2d566 *R/PgR6.R
f2f46140d67d076c3f79239ef805787d *R/PgR6M.R
712f6dd36738e598107d26e0f105b71c *R/PgR6MS.R
87d6b5c20f54e3dca5a1da614e0daf21 *R/active_subset_methods.R
c3589754786116930047e1815ffe052f *R/panaroo_2_pagoo.R
6fefac28affd2c08634c2fb57a442095 *R/panx_2_pagoo.R
7972b02feb6c4d81c2e23b6f3f5a1a8e *R/read_functions.R
ccbb2184b4d7e6946a9efbdc7fc34b1b *R/roary_2_pagoo.R
fe8d5b8578c235cce0979df6b70ebc79 *README.md
13e11d40fa62011fca7bc0cb0a155810 *build/vignette.rds
2b5f34cf27fa8d77bc00711cd7d80ab0 *inst/CITATION
00fbea05d8ef547bb2074d0c00678abf *inst/doc/Input.R
719d429b7c8d8514005e87667c8f716e *inst/doc/Input.Rmd
59a1b87eb306070d95ba47271b4aa1bb *inst/doc/Input.html
0b1f185fb0265f4c007da1fa1c99e2b7 *inst/doc/Methods_Plots.R
47d84a22521f964e54bd08245c6a6b88 *inst/doc/Methods_Plots.Rmd
9a3dd6a68bf89b8980aeedab5639b4d2 *inst/doc/Methods_Plots.html
6689a3a3b4388757ad8652865f015c15 *inst/doc/Querying_Data.R
4c1e6b50329cd23d42d58e36145576f8 *inst/doc/Querying_Data.Rmd
2b3a2251a29c5b98e4ea5c5b2dab8ea0 *inst/doc/Querying_Data.html
e84b097164cbbd11b80b962d78225128 *inst/doc/Recipes.R
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316fffffaf83fe3797a694db159d4db2 *inst/doc/Subseting.R
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5c3598f29f44431cff6eed5bc42e2191 *inst/doc/pagoo.R
68bec9b3f2b940fd0bd785cf4081bcb6 *inst/doc/pagoo.Rmd
26a2048e3f943b557d2a60e732524336 *inst/doc/pagoo.html
65891b30d862c60dceac74575a3a6442 *inst/extdata/campylobacter.RDS
6cfb6b59fa17afb70e459b36c2b5f236 *inst/extdata/toy_data.tar.gz
671a1c661813943fd6269d3498eeed44 *man/PgR6.Rd
78895b60db65ae1672e5393d089d823e *man/PgR6M.Rd
9fb43bdaa81f314e35003f1371ccbee6 *man/PgR6MS.Rd
06c73b7c89337bdb41845feba84ae828 *man/load_pangenomeRDS.Rd
69281c23f01609a0452743bc14c6a392 *man/pagoo.Rd
81495c595475efdad07ed0f6c2f78338 *man/panaroo_2_pagoo.Rd
ae6a8926f6608f6e1c89439259448ac4 *man/roary_2_pagoo.Rd
d43953402c59c91e019a56b413b1bb4f *tests/testthat.R
7101ca1f6e5ebc7f05681acdc22a50f4 *tests/testthat/test_input.R
cf026827e843dd01a3de6da51ccc1685 *tests/testthat/test_methods-plots.R
bab90faa5f335a9614af47b2017c52d7 *tests/testthat/test_subset.R
719d429b7c8d8514005e87667c8f716e *vignettes/Input.Rmd
47d84a22521f964e54bd08245c6a6b88 *vignettes/Methods_Plots.Rmd
4c1e6b50329cd23d42d58e36145576f8 *vignettes/Querying_Data.Rmd
abba17e213261626567eab6b02e8b58b *vignettes/Recipes.Rmd
e8302e2c16afe4a00abed042c011fb53 *vignettes/Subseting.Rmd
68bec9b3f2b940fd0bd785cf4081bcb6 *vignettes/pagoo.Rmd
