4f53124b082eeaf6dab92156afb90eb7 *DESCRIPTION
c9b0596c7a53bc4a84142a0d85d4c2b5 *NAMESPACE
2976e7064afe24942db4c933cb5027a5 *R/RcppExports.R
90e3e84e252598a58a812a040e2bfced *R/asr_empirical_probabilities.R
989b7786c5d618f4b4a278f60d277a71 *R/asr_independent_contrasts.R
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942b9eaa32dc69a89b027ecc06b056be *R/asr_mk_model.R
085126368e9a7434358a27646b8765a6 *R/asr_squared_change_parsimony.R
f6a1c71281b5713a4f8fe75745bbc76f *R/asr_subtree_averaging.R
894851437c8a46c62726de293434b1a0 *R/auxiliary_routines.R
1c15800df049bcc1a2833ca818225313 *R/collapse_monofurcations.R
ca3a8f5b310f31342c77c7e4ad07f4eb *R/collapse_tree_at_resolution.R
bfe0fd12c907c06da622ed4fd7717a7e *R/congruent_divergence_times.R
ed08f210d9d58e430c7302290ff5124a *R/congruent_hbds_model.R
b064cb759b01e504b9e7a79cd6c98dfc *R/count_lineages_through_time.R
d736e8020a5799df6ce10fb5d6b3baae *R/count_tips_per_node.R
8da52b00662bbdd3a08fcf62718191d9 *R/count_transitions_between_clades.R
d81ceeaec9a422307f401035a640debb *R/date_tree_red.R
c6ef01fbd67c34a39f26d070ec44b580 *R/evaluate_spline.R
5ca0e410c6967b748b8e0346666f9180 *R/exponentiate_matrix.R
3f734a938a3b46655dc1f4023876786e *R/extend_tree_to_height.R
33afe93c2a7a8b34d5954773c34864a4 *R/extract_fasttree_constraints.R
f2609325246e3e12067277b78c354d91 *R/find_farthest_tips.R
282db5ffca1fde87785a7864d03e14c4 *R/find_nearest_tips.R
5e8a110182785dc41dcc0ac88f009ea0 *R/find_root.R
1ea97c12588e374ad6949df8e6c799d7 *R/find_root_of_monophyletic_tips.R
3ec0b212268ef1929f8872e8c159b977 *R/fit_and_compare_bm_models.R
3d93702e9c6153f1420dd8a20cb7532f *R/fit_and_compare_sbm_const.R
6fe0775dcdda2a4b52b318f242891960 *R/fit_bm_model.R
13f214aeb5194046c4c901dd6d16f985 *R/fit_hbd_model_on_grid.R
1da05948c6ba405e9fe7147a358421c8 *R/fit_hbd_model_parametric.R
35e28e4b433fbff8a219d56c25cd24ce *R/fit_hbd_pdr_and_grid.R
542126f75e1cc5a690106dd04a8398a7 *R/fit_hbd_pdr_on_grid.R
9af1d9740d0e9ec5e173f50bc7780c1b *R/fit_hbd_pdr_parametric.R
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c8e13d04fe740f87602d20d779b31cab *R/fit_hbds_model_on_grid.R
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c8340e4ab76d12fd6d25028f846e1c8a *R/fit_mk.R
9dd67a5f4c5aa2d9a08d420379335849 *R/fit_musse.R
64bf0729d56d8c3245177d23dec27cf8 *R/fit_sbm_const.R
22e4e5cac492aa3270c1a4cbb65050fe *R/fit_sbm_const_biased_sampling_unfinished.R
9b099f4e5b014da54c46fb1259ced367 *R/fit_sbm_linear.R
1aa664162ab503d895e5a3838188e7f8 *R/fit_sbm_on_grid.R
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e0708c76274946015929244c7df27a4e *R/fit_sbm_trend.R
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1ecc8baaf771d555fc31811b1f6e3a40 *R/forest_distance.R
0eed8b7b366c3f7ec5f9e3e4b7536d96 *R/gamma_statistic.R
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1ff57e6c9244cf199fb235da349e9da3 *R/get_clade_list.R
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739cfa90829862086fa2b2dcaf04293d *R/loglikelihood_hbd.R
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a766e7b11778e65ee89d4c14ac9c0ed1 *R/simulate_deterministic_hbd.R
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5ec58112eb169070e83d64cc1ca29b75 *inst/CITATION
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