fc788f3057c721cd62ca907715e0e2c2 *DESCRIPTION
bd284c59e3ecb61d4c4d8d20e5cf1b88 *NAMESPACE
132c226c95616d3236bc804883779879 *R/benchmarkIncidencePrevalence.R
e1564436d2efdc93f5737a24e7ed2f2e *R/bindEstimates.R
3ed25412cd725da9d5e0a765bffa3fd1 *R/estimateIncidence.R
e331ba65abde30b5baf47653da948612 *R/estimatePrevalence.R
bdbe96293bb649c121bae1056b493ec1 *R/exportIncidencePrevalenceResults.R
b7e5f5c0cbf44d282b6a0c49ec9f5c2b *R/generateDenominatorCohortSet.R
a841dc00090a6c657684fe14539a9758 *R/getDenominatorCohorts.R
246ffeddb950d1137f71afd9b508ac71 *R/getIncidence.R
7d5c2c0fa5992ad07b8ab14d666afee6 *R/getPrevalence.R
21a9f702eb3955d3f97e6c4866a2b06b *R/getStudyDays.R
e9536d8dc707669f2de1af958065a0f2 *R/incidencePrevalence-package.R
be166ba0e59e2142dc648c9c513e1477 *R/inputValidation.R
a727999dc75c51c877b2907d30d303cd *R/mockIncidencePrevalenceRef.R
a56d8cf908dc08d526877bea58ef4179 *R/obscureCounts.R
370ddd2a8e318b39aa78b5bccab91178 *R/plotting.R
1311f2b792b1384edf8f34cfff8d5f0e *R/recordAttrition.R
cf794928715019cf81bd51d467156178 *R/utils-pipe.R
a155c6c7bb4ebb1d50cf7b364620b09a *R/utils.R
72002402758f5a09a0cbba93313929ca *README.md
51b852b8fab8fed5dcc6feb92e52a6dc *build/vignette.rds
227b706eccd20b194b10f22549e09395 *inst/WORDLIST
dc6768ce49dd7543cd7f933d705b01c6 *inst/doc/a01_Introduction_to_IncidencePrevalence.R
19d769a0022818390b64b9156f71150c *inst/doc/a01_Introduction_to_IncidencePrevalence.Rmd
3211fce9a79d0911dba93fe48e31d54d *inst/doc/a01_Introduction_to_IncidencePrevalence.html
912dec809101dfab7bcd4d72641b134f *inst/doc/a02_Creating_denominator_populations.R
177f84c0c874d6f8dd69e4ab74637bf4 *inst/doc/a02_Creating_denominator_populations.Rmd
01ebad4c399af9fcc87b33c1bf7407de *inst/doc/a02_Creating_denominator_populations.html
e047f3f56b5126f55b953c707df5f662 *inst/doc/a03_Creating_outcome_cohorts.R
e284e41c4463e982c1cc0d06d153559a *inst/doc/a03_Creating_outcome_cohorts.Rmd
f4d962c95dea961fe2d56057234706d6 *inst/doc/a03_Creating_outcome_cohorts.html
2f4320b2bb686c4ae634be1c7ce9a46e *inst/doc/a04_Calculating_prevalence.R
fe442ae32daca3f7a3ece09ab979cd79 *inst/doc/a04_Calculating_prevalence.Rmd
f8c80513f427a44b66d7013fa2b00dd3 *inst/doc/a04_Calculating_prevalence.html
5d4c6d1b0917261fb4d9c2ec2eb33e3c *inst/doc/a05_Calculating_incidence.R
805ec139aab1ee72ac71fc72d8e032c3 *inst/doc/a05_Calculating_incidence.Rmd
d8e3884bc52a4ba36e776d8f6da281a1 *inst/doc/a05_Calculating_incidence.html
1efc5f34b9621befdc8f457cc1940456 *man/IncidencePrevalence-package.Rd
a3c8fc37153eaa12e3d20ca3314fd985 *man/benchmarkIncidencePrevalence.Rd
c535569673bdc616623cdf3da80537e3 *man/bindIncidenceEstimates.Rd
8305db6a17bba73723ff62a85e664cba *man/bindPrevalenceEstimates.Rd
7bd68ec04c4038889bafb34f5d71b2f3 *man/estimateIncidence.Rd
d5c472f20025e5cbfffe7956776576c1 *man/estimatePeriodPrevalence.Rd
f855ea90b5425188e14fb91259868230 *man/estimatePointPrevalence.Rd
8f44eb54f746218e1e0dc84f046fa831 *man/exportIncidencePrevalenceResults.Rd
48a573a5113ac4a5b75c2a4031594ed4 *man/figures/hexsticker.png
9603f90175ff8cc1b021026109e94fa0 *man/generateDenominatorCohortSet.Rd
885a1223f6871b567bb0f9ecacb32b65 *man/incidenceAttrition.Rd
f3ce0f6d92106add0caadfde1c1afed3 *man/incidenceSet.Rd
d9502a8b495f40f48d2dafe30db725a5 *man/mockIncidencePrevalenceRef.Rd
76d90157812a4aff34cf8680f4aab27d *man/participants.Rd
29ee7383caa7fc8c14f52bd035509064 *man/pipe.Rd
a3b5c71b7e18d7f028a89bad1fe280a6 *man/plotIncidence.Rd
d409a126577cebeba3b46869e7fdf80c *man/plotPrevalence.Rd
6a42b1f767dcbbe141fd7610faa22f4e *man/prevalenceAttrition.Rd
c9e713bce4c0b3a19f7de00493e49dab *man/prevalenceSet.Rd
2f7c1ff89abe262eea81c390c5b432ae *tests/manual/README.md
9afca1aaaa9c9f2578bcee67f5122bf8 *tests/manual/test-dbms.R
c87bbc0907d13349f888ec782ebe412f *tests/manual/test-eunomia.R
80372f53de4373ac2d61434b9f3822be *tests/testthat.R
1414fa662779a4d6ef0a50a1cccb9875 *tests/testthat/test-benchmarkIncidencePrevalence.R
60d14529152e4721d04b3a9866a7d1b2 *tests/testthat/test-bindEstimates.R
536bfbb5bead41f58a50f2bb7339a0bc *tests/testthat/test-estimateIncidence.R
aa78aa3172c7dfc05edd8c10456cd9c2 *tests/testthat/test-estimatePrevalence.R
0fdf82c17c7660f338bdd7426f6be42b *tests/testthat/test-exportIncidencePrevalenceResults.R
9163d7f4022e173525b0c66a90d97f5c *tests/testthat/test-generateDenominatorCohortSet.R
65a1e5007c8effe14af6cbd306c28a73 *tests/testthat/test-getStudyDays.R
ea3b3fcc64d15219ce35c4dc6d191848 *tests/testthat/test-mockIncidencePrevalenceRef.R
790628c87781caadabd5844b8238ee36 *tests/testthat/test-obscureCounts.R
4ba55190b292ba37a77140bf3f428c36 *tests/testthat/test-plotting.R
61028735b6f3b637484b4a4ca75f38b5 *tests/testthat/test_should_fail/test_database_result_1_2023_10_04.csv
5c47bc3531c7e9da0c8f39acc001eade *tests/testthat/test_should_fail/test_database_result_1_2023_10_17.csv
19d769a0022818390b64b9156f71150c *vignettes/a01_Introduction_to_IncidencePrevalence.Rmd
177f84c0c874d6f8dd69e4ab74637bf4 *vignettes/a02_Creating_denominator_populations.Rmd
e284e41c4463e982c1cc0d06d153559a *vignettes/a03_Creating_outcome_cohorts.Rmd
fe442ae32daca3f7a3ece09ab979cd79 *vignettes/a04_Calculating_prevalence.Rmd
805ec139aab1ee72ac71fc72d8e032c3 *vignettes/a05_Calculating_incidence.Rmd
cdae2641683aded95cec6dad94841a6e *vignettes/denominator_pop_inclusion_fig1.png
6f8a8e6e770268ba412a398f7d2e118c *vignettes/denominator_pop_inclusion_fig2.png
00795028114b0238ae6998e51bf084d7 *vignettes/denominator_pop_inclusion_fig3.png
012fa3b32f988f280bc6802496b39a3b *vignettes/dpop1.png
30f1fab5decb81c3d47481e9de1f55b3 *vignettes/dpop2.png
f905c6b05ad4ec1e511d972986e92e05 *vignettes/dpop3.png
130b79294f59e7ca03e6bc91dc8e78cf *vignettes/dpop4.png
bd75bc03a34508656583cf073c17de02 *vignettes/inc_no_rep_no_washout.png
2a4e213fe56e0fb66bf2533e0d6457ad *vignettes/inc_no_rep_some_washout.png
6c7877619553646b18857d85e7714852 *vignettes/inc_no_rep_washout_all.png
72c0b255131e7bc6c5292ea1e66bfaeb *vignettes/inc_rep_some_washout.png
c3ecb2014b92d9353d01119f6203b5d2 *vignettes/mock_db_fig1.png
18c6ac379e28ea9ff18a25014fe8ed5e *vignettes/mock_db_fig2.png
80994edc140d40662fe44ca3c54162a3 *vignettes/mock_db_fig3.png
38ac974e5a58d33e44cd0359772777a0 *vignettes/numerator_pop_fig1.png
91dfebce43f482f12b1e305ff6514a05 *vignettes/numerator_pop_fig2.png
12ed94210ae9a969b70a96732cb4aabb *vignettes/numerator_pop_fig3.png
40f22b3509fcfbfaac7f119ddd7bf164 *vignettes/period_prev.png
b5ca590df13f2a24e321bfa48a275655 *vignettes/point_prev.png
