bibentry(bibtype="Article",
  key = "zhang2013deciphering",
  header = "To cite the functional chi-square test in publications use:",
  title = "Deciphering interactions in causal networks without parametric assumptions",
  journal = "arXiv Molecular Networks",
  year = "2013",
  page = "arXiv:1311.2707",
  author = c(person("Yang", "Zhang"), person("Mingzhou", "Song")),
  url="https://arxiv.org/pdf/1311.2707v3.pdf",
  textVersion = "Zhang, Y. and Song, M. (2013) Deciphering interactions in causal networks without parametric assumptions. arXiv Molecular Networks, arXiv:1311.2707. Retrieved from URL https://arxiv.org/pdf/1311.2707v3.pdf"
)

bibentry(bibtype="PhdThesis",
  key = "zhang2014nonparametric",
  header = "To cite the comparative functional chi-square test in publications use:",
  author = person("Yang", "Zhang"),
  year = "2014",
  title ="Nonparametric Statistical Methods for Biological Network Inference",
  school = "New Mexico State University",
  textVersion = "Zhang, Y. (2014) Nonparametric Statistical Methods for Biological Network Inference. Unpublished doctoral dissertation, Department of Computer Science, New Mexico State University, Las Cruces, USA"
)

bibentry(bibtype="Article",
  key = "zhong2018eft",
  header = "To cite the exact functional test in publications use:",
  title = "A fast exact functional test for directional association and cancer biology applications",
  journal = "IEEE/ACM Transactions on Computational Biology and Bioinformatics",
  year = "2018",
  note = "In press",
  author = c(person("Hua", "Zhong"), person("Mingzhou", "Song")),
  textVersion = "Zhong, H. and Song, M. (2018) A fast exact functional test for directional association and cancer biology applications. IEEE/ACM Transactions on Computational Biology and Bioinformatics. In press"
)

bibentry(bibtype="Article",
  key = "song2014hunting",
  header = "To cite the comparative chi-square test in publications use:",
  title = "Hunting complex differential gene interaction patterns across molecular contexts",
  journal = "Nucleic Acids Research",
  year = "2014",
  volume = "42",
  number = "7",
  page = "e57",
  author = c(person("Mingzhou", "Song"), person("Yang", "Zhang"), person("Alexia", "Katzaroff"), person("Bruce", "Edgar"), person("Laura", "Buttitta")),
  url = "https://nar.oxfordjournals.org/content/42/7/e57.full",
  textVersion = "Song, M., Zhang, Y., Katzaroff, A. J., Edgar, B. A. and Buttitta, L. (2014) Hunting complex differential gene interaction patterns across molecular contexts. Nucleic Acids Research 42(7), e57. Retrieved from URL https://nar.oxfordjournals.org/content/42/7/e57.full"
)

bibentry(bibtype="Article",
  key = "zhang2015chinet",
  title = "{ChiNet} uncovers rewired transcription subnetworks in tolerant yeast for advanced biofuels conversion",
  journal = "Nucleic Acids Research",
  year = "2015",
  volume = "43",
  number = "9",
  page = "4393--4407",
  author = c(person("Yang", "Zhang"), person("Lewis", "Liu"), person("Mingzhou", "Song")),
  url = "https://nar.oxfordjournals.org/content/43/9/4393.long",
  textVersion = "Zhang, Y., Liu, Z. L. and Song, M. (2015) ChiNet uncovers rewired transcription subnetworks in tolerant yeast for advanced biofuels conversion. Nucleic Acids Research 43(9), 4393--4407. Retrieved from URL https://nar.oxfordjournals.org/content/43/9/4393.long"
)

bibentry(bibtype="Article",
  key = "sharma2017simulating",
  header = "To cite the simulate_tables() function in publications use:",
  title = "Simulating noisy, nonparametric, and multivariate discrete patterns",
  journal = "The R Journa",
  year = "2017",
  volume = "9",
  number = "2",
  page = "366--377",
  author = c(person("Ruby", "Sharma"), person("Sajal", "Kumar"), person("Hua", "Zhong"), person("Mingzhou", "Song")),
  url="https://journal.r-project.org/archive/2017/RJ-2017-053/index.html",
  textVersion = "Sharma, R., Kumar, S., Zhong, H. and Song, M. (2017) Simulating noisy, nonparametric, and multivariate discrete patterns. The R Journal 9(2), 366--377. Retrieved from https://journal.r-project.org/archive/2017/RJ-2017-053/index.html"
)
