e531a542329e736e578714d6dc54d00b *CHANGELOG
d32239bcb673463ab874e80d47fae504 *COPYING
39067de94168d0c7c5011727f655ef78 *DESCRIPTION
6172140758d985c69dd79968134c53e2 *NAMESPACE
f6388770875c2172d51b02ffc2017fd7 *R/BGLR.R
1725a61cb341081a74fcfb406ee7913a *R/methods.R
d8f6ce734b10e8e2097636e7cb02c19c *R/utils.R
3ffa410c6f9fe9cb6f2db5d809077a05 *build/vignette.rds
a36da779980e7340110960eaf232ed71 *data/datalist
b4a5a1f479a25428f68918482cc8da25 *data/mice.RData
6dd52a7029d9f70e7634965024000a72 *data/wheat.RData
248408b42ff364072d9a9c43b2438b2c *demo/00Index
d274b632296d113d221bb4518769f501 *demo/BA.R
5ff9fbe7907c2f998a22b80fdda251e1 *demo/BB.R
fb48c8a2f8cb5cd03e2696daaac24ca8 *demo/BL.R
192c18e504fc67c7d8ff7bc2d9a72279 *demo/BRR.R
8ba2369677bdb64416569abac7d203da *demo/BRR_sets.R
406c589b01a88535b9f0e0bb2f218b23 *demo/BayesC.R
6397ecdb57c2852d8310336f0d7895bd *demo/Bernoulli.R
5f4c7fa245517398d5197bc0129b5e64 *demo/RKHS.R
0da64fbf958e905f01d944603cb54260 *demo/RKHS_KA.R
4fa7c12b675b9b182fa5a27e9d8fd9d3 *demo/censored.R
885a602269c88f3f6ee6b9a60eb2c4d7 *demo/ordinal.R
3d99b5ad05fa18a270de1f3dcea37720 *demo/read_bed.R
496d268b01354126cb4a8ac7fa190cbb *demo/read_ped.R
7a807e731ebb7dd9cbfb319a891aee7b *demo/write_bed.R
84b22961f2c8a614002799a28863f1b7 *inst/doc/BGLR-extdoc.Rnw
26e5fafd39b979cb253429672381490a *inst/doc/BGLR-extdoc.pdf
e0afd876c83056ea3294f7903c20b7e5 *inst/extdata/sample.bed
71d452624e9dbea681f7350391e643a9 *inst/extdata/sample.bim
631cbdbb5ee368ba4e3a5ac3325c9081 *inst/extdata/sample.fam
09e48311d02568f943f149920ab16620 *inst/extdata/sample.map
835ab6eee1c651bad27b81a1ae79abef *inst/extdata/sample.ped
0e4964107d470f6ca6d528634474b41d *inst/md/BRR_sets.md
d39d174f5c61a6ddec327820b45a761c *inst/md/BayesianAlphabet.md
8acb352604432362aa5636340360e69a *inst/md/GBLUP.md
701e74c8e0a2c06fb1c734d2e3cc20ce *inst/md/GxE_usingInteractions.md
105b47b4c50511213bde86b024b84433 *inst/md/PC.md
00a45c653eeff166e2f38e7c29d31203 *inst/md/RKHS.md
9193f18a1fcb3a5087581c9313fa7368 *inst/md/Validation.md
659a40153636a045dc964a0a4800eb21 *inst/md/categorical.md
b29b4e6cc7704dc6868e44cf40298627 *inst/md/censored.md
af5c40a1fa092dbdbc65c8e245fae052 *inst/md/effectsBRR.png
38fa6137d5f52eb436f7ca3dd0057e8d *inst/md/example_heteroskedastic.md
6530af1430a9a6257fe2ec3b3437e80c *inst/md/example_saveEffects.md
8e5740941ad19648dc0b5cfcf03e1457 *inst/md/example_sets.md
08f9f18514e92939a7d17030ae8796e8 *inst/md/heritability.md
cfda71fe1121307910e207c78399ebe0 *inst/md/heterogeneity_interactions.md
ce932de21aae2e751ddf020739e19b44 *inst/md/hyperparameters.md
a4b7b83b6668bb3e748a43d5ea9fff7d *inst/md/mixedModel.md
e87a6ff14ab0d6a74e626b59a5bf4c68 *inst/md/omicIntegration.md
0c245254f7c58a035832178e32602aa7 *inst/md/parallel.md
7918bf9a260d0a5cca8f063235cb549e *inst/md/priors.jpg
adc8e1b78491662ab01fc9206697f879 *inst/md/simulationHumanGenos.md
badbe936a809d2109c99a3f28af57ae5 *man/BGLR.Rd
f95e8cd001b65068778606898f2204dc *man/BLR.Rd
5407ad7ed45165a69da28bd88aad5667 *man/figures/ETA.png
8de3700ed1040a13b816067ae92e2be8 *man/getVariances.Rd
ccd75f391055433b46aad81e81873ec5 *man/mice.A.Rd
91b74f969c95eb92143034d5bb2a6505 *man/mice.Rd
c212e80a1fbada745756ef99678530bd *man/mice.X.Rd
608b482cae983299af3c976a7e6079a9 *man/mice.pheno.Rd
ecf97181c49180423cd5025f38ffc2ff *man/plot.BGLR.Rd
fdc6ba815c54a1e762a70a41f33b8794 *man/predict.BGLR.Rd
b0170ef2b90c20c005fdadae93949c90 *man/readBinMat.Rd
2d97cbf7577974fbc5751819d50b3ac4 *man/read_bed.Rd
3a5d57b34eed59338ced190a1c9c0d07 *man/read_ped.Rd
58ebf640046d781e6e0586ffae4511fc *man/residuals.BGLR.Rd
5916a251fa98095de18f4c492dc7c8a1 *man/summary.BGLR.Rd
aac05ab1107e9bcc8b812f17eea893f3 *man/wheat.A.Rd
1825072b4e1791cab7081604a582afe0 *man/wheat.Rd
37b97b90197c655c2824816f03304048 *man/wheat.X.Rd
1787202aaa9bde500398cb1081639967 *man/wheat.Y.Rd
ddd2d788344c4a9fcf4b35866253d19a *man/wheat.sets.Rd
6cce6f3e24465767872faba4e5e9a64f *man/write_bed.Rd
a1a856bf2fa53147b31435b1cd38eda3 *src/Makevars
0c6c6b0edba0e61ec8b6ec8e9a3b2518 *src/Makevars.win
4f774842b6c58a4133bda078d7a9aa48 *src/util_plink.c
78f0cb5af38a71c96ac6892e9eb31a66 *src/util_sample.c
acf13aa32cf5691574fa2aa506ef7221 *vignettes/BGLR-extdoc.Rnw
9619d7b9f8c991a7e229bd45da162012 *vignettes/fig_1.pdf
8f5e58bc1548ff4e87bdf02f6616f5b9 *vignettes/fig_2.png
c1d040a66ab627b0b75e491b711280b3 *vignettes/fig_3.pdf
bb801a7119bc19281fd8c1b7779a8bb3 *vignettes/fig_4.pdf
5d07f37202a849c16435e32010bf8b05 *vignettes/fig_5.pdf
f030b504ada0714071f2ee5070910538 *vignettes/fig_6.pdf
3c84fd0efa9dee6497c82c7c0e8e3c79 *vignettes/references.bib
