cluster.threshold       Cluster threshold an array.
cov.est                 Estimates the covariance between neighbouring
                        voxels
EC.3D                   Expected Euler Characteristic for a 3D Random
                        Field
f.analyze.file.summary
                        prints summary of .img file contents
f.analyzeFMRI.gui       starts AnalyzeFMRI GUI
f.basic.hdr.list.create
                        creates basic .hdr list
f.ica.fmri              Applies Spatial ICA (Independent Component
                        Analysis) to fMRI datasets
f.ica.fmri.gui          tcltk GUI to apply ICA to fMRI datasets
f.plot.ica.fmri         Plots a specified component from the output of
                        f.ica.fmri
f.plot.ica.fmri.jpg     Plot the components of the ouput of f.ica.fmri
                        to a series of jpeg files
f.read.analyze.header   read Analyze header file
f.read.analyze.slice    read one slice from a .img file
f.read.analyze.slice.at.all.timepoints
                        reads a slice at all time points from a .img
                        file
f.read.analyze.tpt      Read in a volume at one time point
f.read.analyze.ts       read in one voxel time series
f.read.analyze.volume   read whole .img file
f.spectral.summary      plots graphical summary of spectral properties
                        of an fMRI dataset
f.write.analyze         writes an array to a .img/.hdr pair
f.write.array.to.img.2bytes
                        write array of 2 byte integers
f.write.array.to.img.8bit
                        write array of 1 byte integers
f.write.array.to.img.float
                        write array of 4 byte floats
f.write.list.to.hdr     writes a .hdr file
GaussSmoothArray        Spatially smooth an array with Gaussian kernel.
GaussSmoothKernel       Calculates a discrete Gaussian smoothing
                        kernel.
model.2.cov.func        Calculates covariance from Hartvig Model 2
model.2.est.gamma       Estimate gamma for Model 2 of Hartvig and
                        Jensen (2000)
N2G                     Fits the N2G model
N2G.Class.Probability   Posterior Probabilities for N2G model
N2G.Density             Calculates the density function for the N2G
                        model
N2G.Fit                 Optimzation function for N2G model
N2G.Inverse             Transform parameters of N2G model back to their
                        real domains
N2G.Likelihood          Calculates the (negative) Likelihood of the N2G
                        model
N2G.Likelihood.Ratio    N2G Likelihood Ratio's
N2G.Region              N2G Normal component interval
N2G.Spatial.Mixture     fMRI Spatial Mixture Modelling
N2G.Transform           Transform parameters of N2G model so as to lie
                        on the real line.
NonLinearSmoothArray    Non-linear spatial smmothing of 3D and 4D
                        arrays.
Sim.3D.GammaRF          Simulate Gamma distributed Random Field
Sim.3D.GRF              Simulate a GRF
SmoothEst               Estimate the variance-covariance matrix of a
                        Gaussian random field
Threshold.Bonferroni    Calculates Bonferroni Threshold
Threshold.FDR           False Discovery Rate (FDR) Threshold
Threshold.RF            Random Field Theory Thersholds.
