5b1d538a90e819bfa7445027f357d780 *DESCRIPTION
7d0cbf8e2f2c27bc373ccc5185b62608 *NAMESPACE
0d048d493175b0571ff7619bfc522c79 *R/Betadist.R
a97e05ac4f5cf8f12b36c11d5da33372 *R/R6Model.R
3f7c192edd41add170cda635478e0519 *R/R6covariance.R
1e9c1f5e84bef9c3750bae9423c44cbf *R/R6meanfunction.R
1e3698a3b98df4b5657d329ae6da3748 *R/RcppExports.R
68d33b097ed08155fbcef3ef19ddacb9 *R/extrafunctions.R
54fa3293d5207cbd9949d8ca3d75fa37 *R/lme4_functions.R
b8c5ef948149f02c5f7cf8cc3a66b6d9 *R/model_s3_functions.R
5e389abde8df9ddbd031e9ebd1606ec7 *R/nelder.R
06c197c6bf45cae28f7b7e85694b4f1d *R/printfunctions.R
15f07aaeec088f94efb77f6c437da7f2 *R/stanmodels.R
e1ef2f4166dd018aa06d56b5f8bfe8a2 *build/partial.rdb
7e297a31e37e77c201a2bacff2f979eb *configure
845efca43973cdde1a6174faf1d88e99 *configure.win
945b55cf2fc141dfeac022049ea21628 *data/yexample312a.rda
010ab54b438a90131ee1711c97f4d601 *data/yexample312b.rda
29320128771c3b5ecc520b13f13729e9 *data/yexample312c.rda
83e69ebd9bc8d119b584e5e6470a62ec *data/ytest1.rda
eb162d68e3628da70017a7dca3601cfc *inst/cmdstan/mcml_bernoulli.stan
9c071c5c22cfa7486320e7414abb6cd4 *inst/cmdstan/mcml_beta.stan
59bbab1c5bbe5b8d49119c6e6cbb6dc4 *inst/cmdstan/mcml_binomial.stan
0e6224c8dcd06bda02eaf0722690ef4c *inst/cmdstan/mcml_gamma.stan
7be74349b983769d99bb1ac8003bfb2d *inst/cmdstan/mcml_gaussian.stan
127129986da26c56a50dea0846410ea6 *inst/cmdstan/mcml_poisson.stan
eaba02dca20adccace4c846a8acaf95a *inst/include/glmmr.h
fd3e43ad99bdb3ae110a1d59bb7e0d9c *inst/include/glmmr/algo.h
0f96272d2ba97e131bac3d476f76929c *inst/include/glmmr/calculator.hpp
b4bead9157cc8ac368029d153ca7c2b0 *inst/include/glmmr/covariance.hpp
226676d6c8bc893330f44ff14b153813 *inst/include/glmmr/family.hpp
4dd5e5d76d7f2f3339b13a40934bc6f8 *inst/include/glmmr/formula.hpp
1a1b372702dfd2aa8a4695e0cb50d904 *inst/include/glmmr/formulaparse.h
356348b8409a89b83d454817c139cb94 *inst/include/glmmr/general.h
43d4208972ce91ac7fd58b8026311769 *inst/include/glmmr/griddata.hpp
01f9ce65abcae2dfbcfefad30cd353d2 *inst/include/glmmr/hsgpcovariance.hpp
48d92a0d941f88638cb5b1011bbfd801 *inst/include/glmmr/instructions.h
a2b4bc67b27f659090e751bde4d87e4d *inst/include/glmmr/interpreter.h
d434dba1ce1cf17866a91bc4c5093eb7 *inst/include/glmmr/linearpredictor.hpp
0b4bff21f6fa0a31eb7c00c2fce5a38e *inst/include/glmmr/maths.h
81b7c6f037ac8a60c54fde671b9080c1 *inst/include/glmmr/matrixfield.h
280445e04cdd86b75f95ebfc55716afa *inst/include/glmmr/matrixw.hpp
c86abceb5b13117f44dd6471694d0fb9 *inst/include/glmmr/model.hpp
09db08b08c5abd39f06d47cd254b7774 *inst/include/glmmr/modelbits.hpp
2419fbdab2c76249aae80e362dbb3733 *inst/include/glmmr/modelextradata.hpp
7c032e3ae5aef6fbc117d7cd111cda92 *inst/include/glmmr/modelmatrix.hpp
b3b2bb4ab56e06a80a3f56e1eeb0afc2 *inst/include/glmmr/modelmcmc.hpp
890ec1de73bbef674ab79b68c343ae0a *inst/include/glmmr/modeloptim.hpp
f78e799a09a8bea82370882462f90744 *inst/include/glmmr/nngpcovariance.hpp
9feb22830ca93fb5df92d6b68c76be51 *inst/include/glmmr/openmpheader.h
c8a37ebeb4443b6316dbe0a08d689875 *inst/include/glmmr/optim/bobyqa_algo.h
7f2cba9529cd0f24a012ee77a7fb1e88 *inst/include/glmmr/optim/bobyqa_general.h
66c2b300acd9d2bcf28ab66f0cd82e95 *inst/include/glmmr/optim/lbfgs.h
654a285e3fa48bf30968542e13f88266 *inst/include/glmmr/optim/lbfgs/BFGSMat.h
c7e3d7c0ae3cf539560902a0bba47fe9 *inst/include/glmmr/optim/lbfgs/BKLDLT.h
7bc542ebae65f198cc31696e1ee112ed *inst/include/glmmr/optim/lbfgs/Cauchy.h
b998f47218cea0cfa5b600c8affa6081 *inst/include/glmmr/optim/lbfgs/LineSearchBacktracking.h
5e11d707754dc06054349246d4965c21 *inst/include/glmmr/optim/lbfgs/LineSearchBracketing.h
a03b27fae4bfb3bdc6c108283f9fa7ab *inst/include/glmmr/optim/lbfgs/LineSearchMoreThuente.h
35488847d79a40d60d040d9ef6cead29 *inst/include/glmmr/optim/lbfgs/LineSearchNocedalWright.h
d00c7cf76a0838299c9da38395716fe5 *inst/include/glmmr/optim/lbfgs/Param.h
b34ff8806dfc88aaae0c37d9a181772b *inst/include/glmmr/optim/lbfgs/SubspaceMin.h
b2ecc735b4188907406b6afdb79c4661 *inst/include/glmmr/optim/lbfgsb.h
026bd5552ed5ef84ee91462b22be98b5 *inst/include/glmmr/optim/newuoa.h
0860c81c1c183e2914f47a2fadf10a01 *inst/include/glmmr/optim/newuoa_impl.h
da53c9e8a5ee5813e9197da61f4a184a *inst/include/glmmr/optim/optim.h
3f8af65ef08d491294140101c7a87455 *inst/include/glmmr/randomeffects.hpp
e083ad81e7dbec61fa2591dcbc506b4f *inst/include/glmmr/sparse.h
855c064dbf8deaff96c8dc8a87169109 *inst/include/stan_meta_header.hpp
2ac02033af196352a7b7d7a8681a74d6 *inst/stan/include/license.stan
4fc8b7cc11e536ff4b1ac2e284a87ccf *inst/stan/mcml_bernoulli.stan
407dff0b0ffd04edf4ef9f6898353e4c *inst/stan/mcml_beta.stan
fbe20c94ae59c5e388ea62447ed98b35 *inst/stan/mcml_binomial.stan
7e1e0e9c3ba421fad3e472744168ff12 *inst/stan/mcml_gamma.stan
53f1a65df4a50351e7d81ecc2c99d687 *inst/stan/mcml_gaussian.stan
5d1e164a2c698ebd361c209aa3bc7ab5 *inst/stan/mcml_poisson.stan
db147c6285de88a4f90cffa8bfb8938e *man/Beta.Rd
12db242328b2b1ba15e8f580b1ad4d32 *man/Covariance.Rd
5d778b8a82755f8c17e83864e2f1fe8f *man/MeanFunction.Rd
2da4c69336ce4385029cb192eb6c863f *man/Model.Rd
f6d06d6f273e546b80c3de336d8f9408 *man/coef.Model.Rd
0732f1dc7044e39e96a9a450f5954af6 *man/coef.mcml.Rd
db5a9e44a93f2f44aecea53db0360638 *man/confint.mcml.Rd
035586f3bbcdf82e949b2f3830319f01 *man/cross_df.Rd
6511bdcbf76284f46bf651609b57666f *man/cycles.Rd
b22286d99d95e0b02eecbac35e309e49 *man/family.Model.Rd
c76e5ae0b361231370c475f622fb16bf *man/family.mcml.Rd
d9f704d080d7a8bc37f73464c72acec8 *man/fitted.Model.Rd
a49e66548db922b5cc1741e1b79eb17c *man/fitted.mcml.Rd
246a05d4c8d88a414c34f166d22a9d25 *man/fixed.effects.Rd
4b02bb293976352ed46f6ec86746bd8a *man/formula.Model.Rd
c81126a9de798ba6a8fdd1956c85812d *man/formula.mcml.Rd
862acdedcd356b5e1dc1b45e906048d7 *man/glmmrBase-package.Rd
acdc3ff6a4eb67050d37567fcd1ef3cf *man/lme4_to_glmmr.Rd
0870c642fc151a0593f2cb42132ffe4b *man/logLik.Model.Rd
fba01b599ca0a8a50f6db03d13b0a966 *man/logLik.mcml.Rd
da4c9f3a5c7412160efe089019e854c2 *man/match_rows.Rd
d424d1f5782645a4f454884ef82a7ae5 *man/mcml_glmer.Rd
756f20748b9c29d10d142c4846c00038 *man/mcml_lmer.Rd
ddc38be4ca68bd6cf18c2988f4916805 *man/mcnr_family.Rd
a778e627b8f69d614ae3fea10a933c68 *man/nelder.Rd
26b46931cc5a4d15834665ba17ad431e *man/nest_df.Rd
14009b18fba04d00b1cedc5610f3cdb5 *man/predict.Model.Rd
61d14bec57a5312e183f5450d7dad89d *man/predict.mcml.Rd
007887a487e468ed4795b88b812c3cb4 *man/print.mcml.Rd
e0a8591086a931bd6d494e5acf54064a *man/progress_bar.Rd
43986cf4b2ccffbfe3f4806793f86ef6 *man/random.effects.Rd
e9d34147e85ddf8ec8f0d576a34df3e6 *man/residuals.Model.Rd
cf4361d05c05e9ccb92a8c30406c59cf *man/residuals.mcml.Rd
9002a8fc8b4745d73923ca760ed19997 *man/setParallel.Rd
9e882cc1c07be729562173210ae155b6 *man/summary.Model.Rd
6c7821cb72efde8f071ee7479a9e12f8 *man/summary.mcml.Rd
9e95caeb4eaa23283ad4c89620532e54 *man/vcov.Model.Rd
ac5a5e311702629b731253f93724815f *man/vcov.mcml.Rd
88df7a0688f61dada014f10a5288e6bd *man/yexample312a.Rd
c352628317bc8d5e06446bcf9f5cc8df *man/yexample312b.Rd
02321e666cf723c7c9f2d2a3b610493d *man/yexample312c.Rd
030d412b97d10070bfa14d5dbc3e22b3 *man/ytest1.Rd
f8a460bdd44bc05a033b9fd8e5301265 *src/Makevars
f64c672f3b373b7c7d4757cfa7d06c5c *src/Makevars.win
71bd00f96755278ca71f5e1565391b20 *src/RcppExports.cpp
4ec45665a18d09b22e65b61251c01626 *src/covariance_module.cpp
0775440f2c5d07f7e5180a8aee810b46 *src/linpred_module.cpp
723c05871d8560e244e18c00432d4f9a *src/model_module.cpp
4adad4ed3d75f0fe77e014af3ff7f45e *src/model_module_2.cpp
6d244d3b358f36f7f0bd3604fbf0ee1f *src/model_module_extension.cpp
417aa01314374adade721c249ba53828 *src/openmp_utils.cpp
39b02b2f743c83ba3233b26ce3842243 *src/other_functions.cpp
0825b214dcb9e4ada1be983d03185a0a *src/stanExports_mcml_bernoulli.cc
8d7937e5375c648bbf6af43882504b8d *src/stanExports_mcml_bernoulli.h
7604d1dc8c797bf01c3c377b3daab236 *src/stanExports_mcml_beta.cc
f14c65f8f73c8ff990724582af62089e *src/stanExports_mcml_beta.h
23a0b8e1036c82a4153d55258e0aefb4 *src/stanExports_mcml_binomial.cc
350f155f2cacac6558bbbfe2d626a899 *src/stanExports_mcml_binomial.h
0039ed67a741d8a7ad2b9eaeb3a6ff3a *src/stanExports_mcml_gamma.cc
c25d38d249cd2dfbc6f4a397bd0be6bc *src/stanExports_mcml_gamma.h
9add215703495e8b2d2a491b661aaf33 *src/stanExports_mcml_gaussian.cc
ce33b7081015d2327017f588bc269da5 *src/stanExports_mcml_gaussian.h
b593653b07e37a5d2cb2f8e3d36e8f9b *src/stanExports_mcml_poisson.cc
d0afcf183c4236baf30c6893d1588749 *src/stanExports_mcml_poisson.h
