10f49e4f7d6992dca066230c864e7701 *DESCRIPTION
706176e5427832ea80bc2ba5f13c9771 *NAMESPACE
d196f2e90e2b827e90a4d6c0734785d1 *R/Merge_methylation.R
39f7421b7787671426eca948e923e80c *R/Proce_cli.R
0fb1c6d6ebb753ff63f7cac1d8c6d455 *R/TCGA_id_conversion.R
591386d2741ed3e9707312606e438d3f *R/ann_merge.r
f0fe8288d9d79e1cabe80714575cffea *R/calculate_mean_module.R
1b388c8f0ae456278dfe511abd278f19 *R/calculate_mean_profile.R
f4f297a0afd834ad6bea700092999c79 *R/data.R
de8c5d8d75d9c17535546452c54c352e *R/fpkm_count_conversion.r
9bebdfb50b50e42ebafe97e46630b658 *R/id_conversion_all.r
c1be69effb3b7af293e5a7a74a8489c3 *R/kegg_diff_gene.R
e7704eb1efafbb9254f7c1ce788c7714 *R/prepareChi.r
7d481311eae9f26b1eb187154c60c558 *R/rep.R
8ac5ef79f26db0b15361d28f55e101ca *R/sysdata.rda
215bce416bd0dd243453644f03137db4 *R/zzz.R
e9cb393dd9a2b474043b35a794ba3a4f *README.md
c3d5290222e5baac0bc77023921908b6 *build/vignette.rds
070dceb636fc0300be4b8976b81f767e *data/GSE66705_sample2.rda
1a3e6bbdae10e8ae23a9fe01b8a0bdd2 *data/datalist
26c344440ec0680f674e038a93ce42fb *data/geneExpress.rda
32f4cbf7a8c1a47aaeda3f57c40609ab *data/hgnc.rda
d550740ae774ca8afd6d513f94a68347 *data/hgnc_file.rda
0d27064c8e20b1cc6fd928a98e5812a7 *data/kegg_liver.rda
e7b32221f71207346295f527d6840298 *data/module.rda
44b721329635bc2151cb5dfafaaa0c11 *data/profile.rda
a2654539d5e3d3141966e92ad9606b4a *data/ventricle.rda
f0f96ba3fdb6ec558f3d84a8a5e89a7a *inst/doc/GeoTcgaData.R
2457be2c3b73ff0dcf3d166cd4851f5a *inst/doc/GeoTcgaData.Rmd
6dff64d69a3fff0bb1719fb5f0f21a73 *inst/doc/GeoTcgaData.html
43bfcf92db10522bf7d45c369ba5e839 *inst/extdata/cnv/00de3/HONGS_p_TCGAb3_75_76_77_NSP_G.txt
075dec574908869219c906516fd9dca8 *inst/extdata/cnv/00e8/MICHE_p_TCGAb_428_429_NS.txt
3dde8dc25536e8e332af41d7a24b789c *inst/extdata/cnv/00f9/MINAE_p_TCGA_200_202_203_S.txt
622ac099fcc605ac6dc37bda4bb8074e *inst/extdata/cnv/0a01/KNELT_p_TCGA_b123_131_S.txt
61be42fd9cf5081ce0caa0c26f0e9199 *inst/extdata/methy/0a0b4/jhu-usc.e.H.4.lvl-3.TCGA-13-1405-01A-01D-0460-05.g.txt
80854919652888aef5c861250be935cf *inst/extdata/methy/0a0b4/logs/file1.parcel
06cfb2b7a895c653223c5fc600a3c913 *inst/extdata/methy/0a6b/jhu-usc.e.H.10.lvl-3.TCGA-30-1880-01A-01D-0652-05.g.txt
52a8d94da191da9edf0197914a7b8062 *inst/extdata/methy/0a6b/logs/file2.parcel
6d9708b09a50659a480bfb4b037f2748 *inst/extdata/methy/0ae7/jhu-usc.H.8.l.I.TCGA-30-1714-01A-02D-0563-05.g.txt
f4d5e287a725f0ecfb996b93a120e785 *inst/extdata/methy/0ae7/logs/file3.parcel
3aa53c9db5425dfc6c85ef9a636ce456 *inst/extdata/methy/0b32/jhu-usc.e.H.5.l.TCGA-13-1510-01A-02D-0475-05.gdc_hg38.txt
2505c430fed6013a725a2e95bae710fc *inst/extdata/methy/0b32/logs/file4.parcel
00453808795d9ebfdfdc99d1701d1a9a *inst/extdata/tcga_cli/at.orl.TCGA-2V-A95S.xml
02f2857e34873e819d6a1eba5754c18c *inst/extdata/tcga_cli/ati.org.TCGA-2Y-A9GT.xml
b01ae925009c5b86a0e430fe2b9889dc *inst/extdata/tcga_cli/ats.org.TCGA-2Y-A9GS.xml
38bd2d6df0da5c5e6dfe4121a79cdf5f *man/GSE66705_sample2.Rd
8638338ab540e2ae041d9566ffcfc158 *man/Merge_methy_tcga.Rd
31adf0d40f4a0b9f14cd15fc161940e5 *man/ann_merge.Rd
e396cb858265b6afe99605ad9febfc6d *man/cal_mean_module.Rd
330269e69925a01938c0fc8a88c23b93 *man/classify_sample.Rd
603f271c63821f3bc6231f01d3d27838 *man/countToFpkm_matrix.Rd
dcd9531285553284244ef6b62cde28d0 *man/countToTpm_matrix.Rd
28af9bab236dc946a34ad7525058372f *man/diff_gene.Rd
d858d9ec00649be83561e2e18faebfb7 *man/differential_cnv.Rd
126b5160053cebf96c215ddc7f475f58 *man/fpkmToTpm_matrix.Rd
f435748f7f25d0188ab5682d2a867f46 *man/geneExpress.Rd
8fd4bfe4b5672c2c5b4c1ce4e7abfc3a *man/gene_ave.Rd
0a63b80cf91d313c81d55afe7d71ae3b *man/hgnc.Rd
dab2bfe3d6f97b14b6cb746071deaf29 *man/hgnc_file.Rd
26d59db2feab7cb9edcee3d43ae97fd2 *man/id_ava.Rd
cb9b85f751ee99c64f9ad8da62b95757 *man/id_conversion.Rd
20bfadbc8afde9a45b3782d452a34cdd *man/id_conversion_vector.Rd
609d5f4bd65f9defc3e7bd55c4eb9324 *man/kegg_liver.Rd
47ddd0eda00e2e8a7d44104e2c43cb5f *man/module.Rd
1782394a8a246c2937ff338508d8da66 *man/prepare_chi.Rd
f27c12d81b9574c5825e99565c25a85a *man/profile.Rd
2c3dccb4a3035a30ba3486c12d69c8c7 *man/rep1.Rd
ae209deb821b36db8123c2914df01482 *man/rep2.Rd
20ccfb260f61de2f2e9c2835d3bc4ec1 *man/tcga_cli_deal.Rd
fed79a2ab0a92708fe3487f658b1d9d3 *man/ventricle.Rd
2457be2c3b73ff0dcf3d166cd4851f5a *vignettes/GeoTcgaData.Rmd
