a7902f02394f9f684622ada2dbb5dc99 *DESCRIPTION
3143b4f3f96fbc5c33a15bf94b8f65cd *NAMESPACE
9456eef83359f382e7a4ecd30cdbdecc *R/Beta.NA.R
2d4a7f6e69a1a583baecd2667fd07c82 *R/ComBat.R
e6062670e7aeeb5b9ab443cf60249600 *R/L.R
fa6684051e95963a86957c7ae0ee8b7a *R/aprior.R
ae9ca660f17ddddda43d1248d5df1b56 *R/bprior.R
15ed9c209315738e3a6239c5548f8884 *R/build.design.R
b342aac2016213cc3b5fadff4b4c2e52 *R/cal.cox.coef.R
c91facb30f7857c28c303ff73e39cfe7 *R/calPerformance.auc.plot.R
b02c034a026f81e817f0c0ccbd44280c *R/calPerformance.merge.indep.R
d54237184df11c94cb4056f93eb2a95a *R/calPerformance.meta.R
428d1525194cac95b92fb557ec8e5d3f *R/calPerformance.single.indep.R
855bc3dc10d3b177a7df277ab01ce699 *R/ci.gm.R
f4204a88b066286fc13d682cde24b0bb *R/comb.surv.censor.R
6c0f5227726871abe9fe6b5834269cdf *R/combat.likelihood.R
1f248a8bdbe1a3a1230128af4804c407 *R/compute.combat.R
7bb8071723323b36d5d9efbe1e421730 *R/cross.val.combat.R
6083aaf0ea63f22dfd6824fc88a69243 *R/cross.val.surv.R
f079baecc172148bdac2213b1b8fe3ba *R/design.mat.R
bc563e66011fa461b2cb16fcf6837732 *R/det.batchID.R
d7c0a718c166b75b2a2e3ca028283032 *R/det.set.ind.R
969ed8e00aabb634098b5877919ff69d *R/det.set.meta.R
ac03b4fe9e2ac07640e49c2afe50ae86 *R/detFileName.R
7d806047135d95f6b5c6adb66102c944 *R/eval.merge.simulate.R
95e703c0f3113e3aa257221f92fd7da2 *R/eval.subset.R
b0a0f0238de2dab39af32abb680a6250 *R/excl.missing.R
196356b91be8604a3dd3077c490b461b *R/excl.missing.single.indep.R
80e9ec83796d25ffe622dea9cd5d8e06 *R/excl.samples.R
f2da68cd9ea4b802f6dd57f648b23470 *R/featureselection.R
7e0ad8e25355d7f2591c9fb90fad39ce *R/featureselection.meta.R
a7708597b1369046eb74c7f44f596b43 *R/filter.absent.R
b46d120e8a05b10f386d995d6ad5ea1c *R/generate.survival.data.R
b386c949bf6db5b2178ac63addae37b8 *R/gm.R
1748940e7086b268b95c35939f3d4410 *R/groups.cv.R
9996b1794b78e385cf8972503ee71415 *R/init.plot.R
69b51efc6efb1d9e31b561df4db0cba6 *R/int.eprior.R
3c98ed4cfe306415c64b2da87c39c8b1 *R/inv.normal.R
e217883346da8cad03e563485eadadb4 *R/it.sol.R
980c386af93bc6c5d530051b2467785f *R/iter.crossval.R
0ab7fc5e09ed1e7d9aa372338155d258 *R/iter.crossval.combat.R
ca1b297bdff20120dd8eec86335a8ed4 *R/iter.subset.R
7e5d3e68caf3d998d0318e2256d1d94d *R/list.batch.R
a17eeb906a68061607899d593b449d1d *R/main.merge.indep.valid.R
d9f88653c5531941cb42637274a3391b *R/main.process.R
ed375f6557af236c26a969b9cba11882 *R/main.single.indep.valid.R
8a997eefcc99938c60ca01f7a25ffe68 *R/meta.main.R
51e4b131d57a493459292fb18039f7d5 *R/plotROC.R
c7bc7ccb731babafec14362b36e42471 *R/pool.zscores.R
14018a8efc1417183bfd18446dfc9e70 *R/postmean.R
6fb544e0aabd20f7bd6697241fc650ff *R/postvar.R
b644f38b69748252a70b0bc743950328 *R/pred.time.indep.valid.R
53445bc2ef789b2dc2bfdce4f71015b8 *R/prepcombat.R
832c347196ac0da80ff179b5fcae6416 *R/prepcombat.single.indep.R
46356094215315a26d16f9861e12fa78 *R/prepzscore.R
eb6fb161398ef79c3e0bb80f0f296c78 *R/prepzscore1.R
a24aca1ce111521a25bcd802819fef92 *R/prepzscore2.R
d6723bbe0b28e48ccf41416ea8e81e04 *R/proc.simulate.R
396ac16cd98cb21901131188613f569d *R/shuffle.samples.R
5cab584afcde30f9b398e359dda3a212 *R/splitMerged.auc.plot.R
682bea2cdbc5bc6d9e1599d354e80c01 *R/splitMerged.indep.R
9de026f5e41b2284473e2a4501419023 *R/splitZscore2.auc.plot.R
d0c850884d44ec721a459aaedcc57018 *R/splitZscore2.merge.indep.R
a246246011c47e53a4245f861b22c9ac *R/trim.dat.R
39ee2fe8259d89dc91791cba8c600a73 *R/writeGeno.R
b8aff916deafc2dc80da8a4299932292 *R/writeSamples.R
3165e7cf403c60b8001a3539e9de6d46 *R/znorm.R
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4ed3c35e4b45a9467b26036d951df581 *inst/doc/predictTime.png
68ab041e8b4dcc518ce41f293a6e6b65 *inst/doc/survJamda.Rnw
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de563cc58c8cadb900afae4c57869a85 *inst/doc/survJamda.pdf
3bc5f6f5102b09959e54934dc38d8fc9 *inst/doc/survJamda.tex
6e8623d777a7c40163ba742ba9b84adc *man/Beta.NA.Rd
1d6e240f6cf2b78234d603692ec34a3c *man/ComBat.Rd
646ded7c01acca3e4ad0b0d6c89b74f1 *man/L.Rd
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5e23da36e5122aa0114e89b386977c3d *man/bprior.Rd
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0fffa076a4f283cde20513173b7a0a82 *man/calPerformance.auc.plot.Rd
2291fe71b3cb86a219183711787e5098 *man/calPerformance.merge.indep.Rd
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8f960dc1582c25e9edfe852c81f0a44a *man/ci.gm.Rd
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058f1173b433e3817828fe4ea1cb3c89 *man/combat.likelihood.Rd
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7e13f26e704647aef0d1e79e09558078 *man/cross.val.combat.Rd
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4ff40d5bb1b9ab3b91f3a9feba505fcc *man/design.mat.Rd
5b04f84d91856afb21fa36c7cda42487 *man/det.batchID.Rd
2006c3cd4fd997794d778539484f99d5 *man/det.set.ind.Rd
142bab62db77e3ed57a8353cd9f934da *man/det.set.meta.Rd
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139bde050504f8affde17b384b39527e *man/eval.merge.simulate.Rd
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be70f5bf0686f3610f39932a67fbdd30 *man/excl.missing.Rd
df14f6a008ec7d33203f21d907a7d9ec *man/excl.missing.single.indep.Rd
4beea45191de1d07c50457637258ee04 *man/excl.samples.Rd
44fb51d4870f3fcd92570c309193c13b *man/featureselection.Rd
c68efefe0f028922613ba93167d79b11 *man/featureselection.meta.Rd
4009417876092a78eaf8eeba221544d5 *man/filter.absent.Rd
7d82e8bd2ff0881a60fad6620d289a64 *man/generate.survival.data.Rd
a6705fb240405a047cc3955e190f893e *man/gm.Rd
986b72883876e38b1cdad81567f2413e *man/groups.cv.Rd
9c36c3b3362bdd2fdbbe4a23b7f5c3a3 *man/init.plot.Rd
2298f121894ba83d545d5d847e9d6b12 *man/int.eprior.Rd
46eda15743d29970eb21ab1a485b9cc5 *man/inv.normal.Rd
a352d3aeddbc5cbe838c30aec8c68b85 *man/it.sol.Rd
0f16dde0dc72b9cb37e56ece832d4cca *man/iter.crossval.Rd
0986e5acf5530ca2e7a774ba89ee9ff5 *man/iter.crossval.combat.Rd
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2a7527797be792493fecae3ff903d669 *man/list.batch.Rd
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9cdb43d02dc7f84d9dbfeea08a475144 *man/main.process.Rd
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145979ed57bdec8f2d18b434b0ed520b *man/meta.main.Rd
0b65b1c669a015c6dc6968229d92a00c *man/plotROC.Rd
a4379c704cfdeb9f47a9d232cf4bec13 *man/pool.zscores.Rd
06928cd8599e51fc538af411aeb6ca27 *man/postmean.Rd
5b539388b5a99b9055b21cc2a34d12d1 *man/postvar.Rd
5b0adbabdfba4140ca9db11b9acf165a *man/pred.time.indep.valid.Rd
9a8acb88daf7c1d298c365e4ebe84e62 *man/prepcombat.Rd
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3608db3b89aefd65a94dc990ee1ca2a3 *man/prepzscore.Rd
eb11af89e791fcb0c7ad10aab91bc487 *man/prepzscore1.Rd
7a375ef7c4e0721eff6b7f933f5c1cd9 *man/prepzscore2.Rd
7a77b2e49c7dbed92329c41ec30873e0 *man/proc.simulate.Rd
f6bf392916985f0674704660dedae6cc *man/shuffle.samples.Rd
83b5296a875e6989dba28d630044e8f3 *man/splitMerged.auc.plot.Rd
53ac4447972a62440a4cf1d88b6ddd1b *man/splitMerged.indep.Rd
163a189035d0fe3c7929dd0111fb5787 *man/splitZscore2.auc.plot.Rd
ff54ac7ade67e3bc4ca447e220a068d7 *man/splitZscore2.merge.indep.Rd
7ab8562cfcbffe7bb23ea0a1f32e9fb5 *man/survJamda-package.Rd
6c148f7462b2ac1ba3458f798f398ab3 *man/trim.dat.Rd
9153c3d53b4200ed577a38873067ab9f *man/writeGeno.Rd
231d03a0c83520e8801ccd9ba9d93d60 *man/writeSamples.Rd
e8f245cc60169005360eb7a309cc4330 *man/znorm.Rd
