5edd16d0f53dc4fab36d3e0d8e62d031 *DESCRIPTION
b77b3be5252da7d71f4e8dc4c5bc9a6b *NAMESPACE
a82352e4b6b4a63ea6e31c3fb6414be3 *NEWS
5dd230ab881fe5253ce2c31c40e5307c *R/analysis.R
fe17246c63114feffabc70eff9ccd005 *R/bayes.R
f3cd6d9706296ee3d61e44e95e9aa928 *R/graphics.R
d3ae142288a7f1dd5b8d4477b8112e8b *R/misc.R
a78eba1bc2d85c0280fd77a5ea5fe3d9 *R/model.R
823a58f8d7714857d6407459aadbdebd *R/next.R
3e152bfeab3a82f664bafdacd043d919 *R/workflows.R
46ed80095c1ccd2d2797b62906333562 *build/vignette.rds
dfc76da9a593ce28ef24f61a873581a1 *data/CP.example.RData
948219a7bfbcf0725890253db02ed445 *data/CPsnp.example.RData
e8c6ea7f60ba0977b0367f5f3bfe7a7d *data/abf.data.abfreq.txt.gz
b013d425c9d18d118adbfbcc4cc359cc *exec/sequenza-utils.py
fc731603bfdc4c2055dcdb79d2e3d22e *inst/CITATION
98d2ba294ad8eb038e861e80396c5f63 *inst/doc/sequenza.R
3f58efe45e25231d97605e2943c59780 *inst/doc/sequenza.Rnw
3f106719b2f17c19aa78ec2d71c39d96 *inst/doc/sequenza.bib
74e3057c19c5030c34c5a18db29ff5e4 *inst/doc/sequenza.pdf
f947de129f07281360e87abdf8a82a79 *inst/doc/sequenzaSNP.R
a38c2c43446d095ce4e25077270f4f6f *inst/doc/sequenzaSNP.Rnw
4a766e48f9f923a9fb2a513f2335fbe9 *inst/doc/sequenzaSNP.pdf
1712f9194a4f99bb569b4ba1da64d491 *man/CP.data.Rd
03649c1dca080688f21ca87067f3f1df *man/abf.data.Rd
6a83fce88dcaec2e610264967d683d53 *man/baf.bayes.Rd
d7be764d6f91dce02b179f06429440cc *man/baf.model.fit.Rd
0445e8efbba247f2d65dbe6fde5ef7dd *man/chromosome.view.Rd
fe244c16cd5f09e2e119bce910459308 *man/cp.plot.Rd
877fdcefffb2aea5421c4790464dc0aa *man/find.breaks.Rd
e3a1ec724e1e9ec7f5fb3a21d1099f62 *man/gc.norm.Rd
90fd803411b356c2e492d299955c442e *man/get.ci.Rd
6b3084ae78dfc4b0c19cf097b9f1baa8 *man/model.points.Rd
9faf0f41dea3b51581c24259930c413b *man/mutation.table.Rd
5d7e4a37142d1ed500f925f04397dce6 *man/plot.windows.Rd
4b08136cd331abd3fb8d4480b0066511 *man/read.abfreq.Rd
02aecdd15f8040484a5e9fc8fe83b6c5 *man/theoric.baf.Rd
512c9a0d177d2d0b7eef5fd0b9efd2a3 *man/types.matrix.Rd
1f388b1dc2b36a86cb7bc2c33ce84326 *man/window.values.Rd
c29246a1422a86a6814a872d2a07dc6f *man/workflows.Rd
3f58efe45e25231d97605e2943c59780 *vignettes/sequenza.Rnw
3f106719b2f17c19aa78ec2d71c39d96 *vignettes/sequenza.bib
a38c2c43446d095ce4e25077270f4f6f *vignettes/sequenzaSNP.Rnw
