766200853769f14acd123a79a1c4ae09 *DESCRIPTION
0632cc7589c46bbf4981f0a778f1ef2a *LICENCE
6a15b9091ecea40ea757112c2931a13c *NAMESPACE
a6f9a58a44af031285767421c41c075e *R/PhyloSDEestim.R
b71fe70d16c387bb35e8031012ea7459 *R/bootstrap.R
f2ddf36bebd5ca1036b1cec301e383c2 *R/ci.R
9cf8f785cd1de0354b8bd76d657ac2bd *R/estimBM.R
d4e790b22f98e98a6cb6bc2e9f5f610d *R/estimGLSGC.R
95ce266d49e594a8f271d03be89632e0 *R/estimMAXLIK.R
ac3690d97add18d53fbdcfadfbc8e27f *R/evolmodelest.R
c8d50da2fc5e60f83864d3aea239edd5 *R/fitch.mvsl.R
7ebb10e5dd6c0ac0283fb6bb2a422795 *R/getESS.R
f7680ba3f0add46f4a88ba0bd5134c3f *R/loglik.R
4d3d369498660b6f682b01305aa4b09f *R/make.states.mvsl.R
5a8a7efa822941d06aa687630b6c761c *R/matrixexps.R
f5b6d7d46957e4b398f5e26d2465446f *R/matrixparametrizations.R
496727005450e5af49a873e8196fd876 *R/modelparams.R
31e29b55516fd3460acf620ac6a7fa44 *R/modelparamssummary.R
750e36190d4d0141bbd7fcf15407a322 *R/modelparamstransform.R
47d59cdadd18bb8187b2859041b4dad3 *R/phylgls.R
2614eb2cd4c9a03dd7e2546754521942 *R/phyltree_paths.R
ab4fbb9c07d93add6987bed239d217fc *R/precalcs.R
f104ba636d9ae9f24ddb48ddf9f1ab0d *R/regimes.R
fe65f2a983d4bd861c1d56a7898d8891 *R/sdecovariancephyl.R
276eec3a6aaadb9cf8efdc0aa04d207b *R/sdemoments.R
b492eea3caaf64334857ecf9f4a75507 *R/simulVasicekproc.R
546993e610f1afb2c67160a1ac1485fd *R/simulVasicekprocphyl.R
3f10235448e0c1d7200d299f5646b17c *R/simulclustphyl.R
b5b6fe217842d0da2d0cd521be45d34c *R/trees2slouch.mvsl.R
e350e485cadb9eff6270f0951a080054 *R/wrappers.R
ecf040c24e58cebdeb3c3456aca17000 *inst/CITATION
eb723b61539feef013de476e68b5c50a *inst/GPL-2
d32239bcb673463ab874e80d47fae504 *inst/GPL-3
a70c9d005fcdaf59bbb4b429a17aac79 *man/BrownianMotionModel.Rd
43a3035aba3abfc7a36c12b114393c0d *man/SummarizeBM.Rd
c0432976b3c78482c3cffb500656ebe1 *man/SummarizeMVSLOUCH.Rd
ea0521ec1b1a7b7f087aa33b46287239 *man/SummarizeOUCH.Rd
c0a91f15a43d7705fa26597bca628843 *man/drawPhylProcess.Rd
11a3f004525a59bfd7cde1c555828655 *man/estimate.evolutionary.model.Rd
9300c78877a2acec7de22e749c18cae8 *man/fitch.mvsl.Rd
43998b575ed42f821a4fc92f11767a3b *man/generate.model.setups.Rd
4b9cc389716a32fbd32b1e1648304d0d *man/mvSLOUCH-internal.Rd
371f2908dc938acbe13b471e97229d52 *man/mvSLOUCH-package.Rd
5a5047614d81388e219c6e2e0710cf3b *man/mvslouchModel.Rd
924f762d2ea9802c2716be91ab8ba2b8 *man/ouchModel.Rd
8aa472e5f7c78387e40eb58ff95fe9b0 *man/parametric.bootstrap.Rd
6d62e6605ecbe5f898c8a3ed18b764dd *man/phyltree_paths.Rd
9fd4fef1adbd434f5f945c12bee96b88 *man/plot.clustered_phylo.Rd
2403e9cc8835f33e1722fb9b9d153003 *man/simulBMProcPhylTree.Rd
b46d17dda824ccecdaa38082b7a1d7c9 *man/simulMVSLOUCHProcPhylTree.Rd
da5ec1e68af9bf95d0a4be118ee9c00b *man/simulOUCHProcPhylTree.Rd
123648b78e6232fa3383ccfb89c2d3b1 *man/simulate_clustered_phylogeny.Rd
