c398172517ce070595354efc89cb6803 *DESCRIPTION
ea604049d5833fe9ebd5a3e70c496745 *NAMESPACE
cb36a0043d2a9592b231e9e36b6bfdb3 *NEWS.md
2bc42ad7cced690b488ea063414a6520 *R/filtfast.R
6f2b4c255dd21262654747589cf29178 *R/gapremove.R
06a2e10fcb04db04b2997a98e3a63b27 *R/otucompare.R
9102adf0bdffd9fffcf40dd238a0c1a8 *R/pctopt.R
1c2dc55ae6b7b09973e49a25e11cbedb *R/snvcompare.R
b56ff2b193ecba52f9ec7f3b10cca008 *R/utils-pipe.R
8a072ef39e090cc9c381dbc5df0ee5e4 *R/vqsassess.R
b84904a9e4ad2c59c11831e0a582ece8 *R/vqscompare.R
5cf1a73ce7c9fdeac419ae2b7fb9596c *R/vqscustompct.R
bcf697b703a5d5d109bb8e82988d38cf *R/vqsout.R
9b634a51030d1787ac57b31aa8127f70 *R/vqsresub.R
7ebb7abdd5a2313d39e8834b0d14d4a1 *R/vqssub.R
d4b533fe021a3c27fb07262727264570 *README.md
a5fed15e7abc0c2e34ad3aa27a85e5cd *build/vignette.rds
481bade1b9a457422314328a0e1c96c0 *inst/doc/longreadvqs-vignette.R
cbd180107715663455f2da4115e4995c *inst/doc/longreadvqs-vignette.Rmd
d4df63f06b7da86bb6022a6494f89d81 *inst/doc/longreadvqs-vignette.html
76f5c633c34bab7bc028babdcff058fd *inst/extdata/bad3'end.fasta
d4a93cb88de61f1f0f84c3445b32dee7 *inst/extdata/badend.fasta
0e5dce994c38052d9c3ee3ef51a7d521 *inst/extdata/dissimfast.fasta
7355c1d9db9e5314db9838efeb59d4ef *inst/extdata/gaprichfast.fasta
ac28cdb081d8618ed1818cdd8c06e8df *inst/extdata/m.fasta
0d732105c066255ccdb94d6c302cb9d0 *inst/extdata/mock.fasta
ca0a7c60bbdc423230f6bcf513dc2b06 *inst/extdata/s1.fasta
ec883f25d6ecf623369c69b733dc28ed *inst/extdata/s2.fasta
1e5c6fcea3e749bc3a70388e692227c9 *inst/extdata/s3.fasta
38c210f2e9e11f7b70aa1b8477cd56cd *inst/extdata/s4.fasta
0102b0103d006440eef87d37610d8252 *inst/extdata/sample1.fasta
7e5a45f5e518a4a87a13aef51ea746e4 *inst/extdata/sample2.fasta
105b45f3641e5c37bca3f04d7704dd0a *inst/extdata/sample3.fasta
245b614598023d66508b75360e1e9f2d *inst/extdata/sample4.fasta
9656630e9c7c358e68271867191d4b9b *inst/figures/imgfile.png
ab79d74bf39e61090726f40858852236 *man/figures/longreadvqslogo.png
7a21e741e688934242db43a802acc360 *man/filtfast.Rd
c8b0dbc88397108fdb7e6502d88b5069 *man/gapremove.Rd
480e6306941e8022d5de5efd6e3f0704 *man/otucompare.Rd
4a81d4d9f353de73deb02fbcae6e400f *man/pctopt.Rd
8f4aad003a999fae004ba9361f9a99d6 *man/pipe.Rd
b43670aad1694049827392109196c180 *man/snvcompare.Rd
ca70abee272c83f9d03066e706bef653 *man/vqsassess.Rd
0531615a5c4024613f26c88ddb485b87 *man/vqscompare.Rd
055753206b21d860a2f676fbf56cf30b *man/vqscustompct.Rd
51a78718bee96cae043e49c4558fd5be *man/vqsout.Rd
6f05c2e80e5e7183d989c7f98b67c21a *man/vqsresub.Rd
78682d434fc6fab48cc4fd5092fb7282 *man/vqssub.Rd
cbd180107715663455f2da4115e4995c *vignettes/longreadvqs-vignette.Rmd
