# Tools for Imaging Flow Cytometry

## Documentation for package ‘IFC’ version 0.2.1

- DESCRIPTION file.

## Help Pages

IFC-package | Tools for Imaging Flow Cytometry
autoplot | Automatic Parameters Detection for IFC Graphs
BatchReport | Batch Generation of Graphical and Statistic Report
buildBatch | Batch Builder
buildFeature | IFC Feature Coercion
buildGraph | IFC Graph Coercion
buildPopulation | IFC Population Coercion
buildRegion | IFC Region Coercion
checksumIFC | IFC Files Checksum
data_add_features | Add Feature to IFC_data Object
data_add_graphs | Add Graphs to IFC_data Object
data_add_pops | Add Population to IFC_data Object
data_add_regions | Add Region to IFC_data Object
data_rm_features | Remove Features from an IFC_data Object
data_rm_graphs | Remove Graph from an IFC_data Object
data_rm_pops | Remove Population from an IFC_data Object
data_rm_regions | Remove Region from an IFC_data Object
data_to_DAF | DAF File Writer
DisplayGallery | Gallery Display
ExportToBATCH | Batch File Writer
ExportToDAF | DAF File Writer
ExportToFCS | FCS File Writer
ExportToGallery | Gallery Export
ExportToNumpy | Numpy Export
ExportToReport | Graphical and Statistic Report Generation
ExportToXIF | RIF/CIF File Writer
ExtractFromDAF | DAF File Reader
ExtractFromFCS | FCS File Reader
ExtractFromXIF | RIF/CIF File Reader
ExtractImages_toBase64 | Shortcut for Batch Images Extraction to Base64
ExtractImages_toFile | Shortcut for Batch Images Extraction to Files
ExtractImages_toMatrix | Shortcut for Batch Images Extraction to Matrices/Arrays
ExtractMasks_toBase64 | Shortcut for Batch Masks Extraction to Base64
ExtractMasks_toFile | Shortcut for Batch Masks Extraction to Files
ExtractMasks_toMatrix | Shortcut for Batch Masks Extraction to Matrices/Arrays
gen_altnames | Alternative Names Generator
getAborted | Aborted Batch Files Retrieval
getFullTag | Image Field Directory Full Tag Retrieval
getIFD | RIF/CIF Image Field Directories Extraction
getInfo | IFC File Information Extraction
getOffsets | RIF/CIF File Image Field Directories Offsets Extraction
IFC | Tools for Imaging Flow Cytometry
inv_smoothLinLog | Inverse Smooth LinLog Transformation
objectCleanse | Object Cleanser
objectDisplay | Object Display
objectExtract | Object Extraction
objectParam | Object Extraction Parameters Definition
paletteIFC | R/IDEAS Color Palette Mapping
plotGraph | Plot and Stats Computation for IFC Graph
popsCompute | IFC_pops Computation
popsCopy | Copy Populations from One File to Another File
popsGetObjectsIds | IFC_pops Object Numbers
popsNetwork | IFC_pops Network Display
popsRename | Populations Renaming
readFCS | FCS File Parser
readIFC | IFC Files Generic Reader
smoothLinLog | Smooth LinLog Transformation
subsetOffsets | IFC_offset Subsetting
writeIFC | IFC Files Generic Writer