c40c92007cc98b7fd034be82983d635e *DESCRIPTION
5fd267add85e518595c3fb67ce01b8e2 *INDEX
d9c2d56b08ec4ad730418c5de1c75310 *LICENSE
6f14a6f1c46c807f78f1634aaca03a06 *Meta/Rd.rds
f7d8d56de3ad5616d84d0c7c251cb2ae *Meta/data.rds
50a9fa3e1aa2c47fa7bdbd6e6bb8974e *Meta/features.rds
2e2fbcb5e56d934b6b28a254f75f44b3 *Meta/hsearch.rds
c8a03a7c5c3baf76843b7299eae33d7e *Meta/links.rds
ea16d550955b567c493322b41b186010 *Meta/nsInfo.rds
bd903a581945b4dc00cdd3ee9f5df97a *Meta/package.rds
3f21c2401eab75dcba27c68de883c81c *Meta/vignette.rds
aaca07907850b00ed242e0f5e7985511 *NAMESPACE
98eb36f8aaa0d5048b41e008f4b596d1 *NEWS.md
d6c68f1fe41ced6e98a766a3757313da *R/EpiNow2
7cd9bd599464e4c56826026b0ac86e3e *R/EpiNow2.rdb
73cc571a8f749aed2b24de6acbc62026 *R/EpiNow2.rdx
e33e57a15916fc62c5a4cfcf9fe8e9f8 *README.md
6852ae4ea7ece173eaba33de7584483b *WORDLIST
7aa1fa9013f1fbad7458c46d8166c044 *data/Rdata.rdb
1493de090caa6e3da581a8160e23d3f0 *data/Rdata.rds
76ac4b35f01c14cad44bc03dfd13af54 *data/Rdata.rdx
8ef933db726bd3a6edc5c7f46be16d5f *doc/EpiNow2.Rmd
8ef32ce627a5e251fbb44347f3e8b88f *doc/EpiNow2.html
5e270ae6034b339c2a13d20a5f7d2dec *doc/case-studies.R
2ef5b0690fd446eca58ed92df0b360a1 *doc/case-studies.Rmd
ef512c2e3eaa4002732a5031d8f79b19 *doc/case-studies.html
ee9ccba6617da36a51b7aebe16ea95cb *doc/epinow.Rmd
9c237d4c2a05916190797cd6e0e71452 *doc/epinow.html
5e270ae6034b339c2a13d20a5f7d2dec *doc/estimate_infections.R
d13eaea9fb4a7205f68d788703035b3f *doc/estimate_infections.Rmd
04ca03bb49563b4abd97b35a029080ff *doc/estimate_infections.html
50d5be2532a1b0b5fa548e44a8565b81 *doc/estimate_infections_options.Rmd
add91769ab18000d8912d9c937fdf2c3 *doc/estimate_infections_options.html
f4f9d638eb0ae9217b92b555bb0a9767 *doc/estimate_infections_workflow.Rmd
6a05d90362d725e6e6bdc4b14f2727ba *doc/estimate_infections_workflow.html
5e270ae6034b339c2a13d20a5f7d2dec *doc/estimate_secondary.R
4b03af497e5e8eabc391f4b540e81f6f *doc/estimate_secondary.Rmd
66c60d76130faa302858399059499d99 *doc/estimate_secondary.html
5e270ae6034b339c2a13d20a5f7d2dec *doc/estimate_truncation.R
ee0014020759b24b2d0413d34c2cdd42 *doc/estimate_truncation.Rmd
07a9f50cab62dd223d9b7c7df63b3533 *doc/estimate_truncation.html
577f63efba7d6c28b2c8cbf4adf6f674 *doc/forecasting_multiple_data_streams.Rmd
cdbe66d2c2e5fd9098f9dbee66251c9d *doc/forecasting_multiple_data_streams.html
5e270ae6034b339c2a13d20a5f7d2dec *doc/gaussian_process_implementation_details.R
8193ec3bd2ef2adfea10a645477d7ef6 *doc/gaussian_process_implementation_details.Rmd
841dfa3c6a0addbad13d58be088fceb9 *doc/gaussian_process_implementation_details.html
ed71fe94d284cba98b69c52c391570eb *doc/index.html
fb27f0e3eec23d14dd5b3e67af0e0e51 *doc/prior_choice_guide.Rmd
0be4503093ac10a9c5f5444010941e87 *doc/prior_choice_guide.html
8a5baa13b67ee1e1364000cae34aee1a *extdata/example_estimate_infections.rds
89a2ff0ff6b4984c9c7c56d82cd83920 *extdata/example_regional_epinow.rds
d025db955e13af9dedebb06e9f8e34df *extdata/example_truncated.rds
bf46bcbbeddc3afea3d5ed2b070b4800 *extdata/example_truncation_data.rds
ef9c9971ddca12dc43fe0d14f52978d0 *help/AnIndex
3acc3aa54eaa740e93aac7838528a28f *help/EpiNow2.rdb
c403d2303fed8a71de0aa372bcaeaad0 *help/EpiNow2.rdx
38d13f09a5cbe603bd8810b4bcccd1dd *help/aliases.rds
cb1e46f469cfbbbde29c8b5113e1d789 *help/figures/lifecycle-archived.svg
c0d2e5a54f1fa4ff02bf9533079dd1f7 *help/figures/lifecycle-defunct.svg
a1b8c987c676c16af790f563f96cbb1f *help/figures/lifecycle-deprecated.svg
c3978703d8f40f2679795335715e98f4 *help/figures/lifecycle-experimental.svg
952b59dc07b171b97d5d982924244f61 *help/figures/lifecycle-maturing.svg
27b879bf3677ea76e3991d56ab324081 *help/figures/lifecycle-questioning.svg
6902bbfaf963fbc4ed98b86bda80caa2 *help/figures/lifecycle-soft-deprecated.svg
53b3f893324260b737b3c46ed2a0e643 *help/figures/lifecycle-stable.svg
1c1fe7a759b86dc6dbcbe7797ab8246c *help/figures/lifecycle-superseded.svg
c4dc500b3e1652149e2183217cd1a3f7 *help/figures/logo.png
13ee8411e0e9732264951df0c796a242 *help/paths.rds
c4e88a59b8c87e487c8f0c71748046f0 *html/00Index.html
ee41876c0116916bb04bcf4fe3e43d78 *html/R.css
855c064dbf8deaff96c8dc8a87169109 *include/stan_meta_header.hpp
522da0cf0149df696ca183b2249638f6 *libs/x64/EpiNow2.dll
dfb3a50f123db39e8969d7bfad4a3e58 *libs/x64/symbols.rds
632d3541896854c534dbd0dfe674d553 *stan/data/backcalc.stan
78b82562f11cea4badadbde1dd78acd0 *stan/data/delays.stan
db82f604b3bb7b96916ddb6b7462658d *stan/data/estimate_infections_params.stan
43e20361cba1ed61c1ef75232b6e249c *stan/data/estimate_secondary_params.stan
158d2d5203bcdd11774875c84c40ec4b *stan/data/gaussian_process.stan
471bf9c19187b1f321e089605790a632 *stan/data/observation_model.stan
d36468d576d482212a20356ecbbf689e *stan/data/observations.stan
926fea887ba2b7ef4dbd28a13ff81fe0 *stan/data/params.stan
11c9c829e2f55bfd7d37d88fc418a6bb *stan/data/rt.stan
477c061de4830eb0dcd63d2026e3e0d5 *stan/data/secondary.stan
0c5b7c192ffdfd0b79cb2cb0016dc810 *stan/data/simulation_delays.stan
86392aad64e28fc51cd11c7989716a0f *stan/data/simulation_observation_model.stan
a7fe80dd0952e93a8aa685e1eb75a5f1 *stan/data/simulation_rt.stan
6cc110896965529205ceb689b3d5594a *stan/dist_fit.stan
ed48b11e95e73460a55e94e55ca37387 *stan/docs/Doxyfile
0ad9ad1091778c540de58a7fd6044e47 *stan/docs/DoxygenLayout.xml
5675829ca717a77e76fb6ede80a7c967 *stan/docs/doxygen-awesome/doxygen-awesome-darkmode-toggle.js
355dbb9a81c2aeaaa74b1a53457d7430 *stan/docs/doxygen-awesome/doxygen-awesome-fragment-copy-button.js
587c82d152ac7d1ffba2a4d08bea0408 *stan/docs/doxygen-awesome/doxygen-awesome-interactive-toc.js
bda63a66b1e9794d3934cd7d5ed1e5d2 *stan/docs/doxygen-awesome/doxygen-awesome-paragraph-link.js
b6e01964af0b9001d3509b07d478204a *stan/docs/doxygen-awesome/doxygen-awesome-sidebar-only-darkmode-toggle.css
9bb394bc1fa51225b5aa45b42960dfa2 *stan/docs/doxygen-awesome/doxygen-awesome-sidebar-only.css
bc88db4e2780e139acbd2311d4485f80 *stan/docs/doxygen-awesome/doxygen-awesome-tabs.js
d4504312dc58cc7c10918da4ec05379e *stan/docs/doxygen-awesome/doxygen-awesome.css
0170d5f53d0405d46a49e138f3b1c9c5 *stan/docs/function_groups.stan
c5e5836b9ec069ad4681cc8f92062fe4 *stan/docs/mainpage.md
ad65d8892681864d2e8834e0fd8cce75 *stan/estimate_infections.stan
acd785a1c08a6d18d17476a4936607aa *stan/estimate_secondary.stan
24705681be26c8b1fc7ed1a3a55138a3 *stan/estimate_truncation.stan
0dcb09374941bc57dd0ad0dd088e00c0 *stan/functions/convolve.stan
6c0963a0fc67f87da9e2255bf1e93cc2 *stan/functions/delays.stan
95cc6e4983a505018da736435b26ca0d *stan/functions/gaussian_process.stan
2daa070e4975a9c3a1e1c446c1899252 *stan/functions/generated_quantities.stan
2184be4d8ff38b94c0cf8875d60d08ed *stan/functions/infections.stan
5b4948688d36ea5b7a77e08fb90c2322 *stan/functions/observation_model.stan
c4bb7e734ec3a20b850532035ac94890 *stan/functions/params.stan
8f1bedf4bdad83e399eaa8d31af81763 *stan/functions/pmfs.stan
17ed74c9677b7f1c72baefbbe1712de5 *stan/functions/rt.stan
7b82719ca08ba08cd4ccb6f6c3265a19 *stan/functions/secondary.stan
4a4e476cadf37a7da530161716941473 *stan/include/license.stan
8bc76259e3d3a1d9f6ae3832632b92b1 *stan/simulate_infections.stan
0f8155ae510ff2623900fe6a97c6ef7a *stan/simulate_secondary.stan
